Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_0935 |
Symbol | |
ID | 7298605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 1052813 |
End bp | 1055182 |
Gene Length | 2370 bp |
Protein Length | 789 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 643593727 |
Product | DNA ligase D, 3'-phosphoesterase domain protein |
Protein accession | YP_002491352 |
Protein GI | 220916048 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase [COG3285] Predicted eukaryotic-type DNA primase |
TIGRFAM ID | [TIGR02776] DNA ligase D [TIGR02777] DNA ligase D, 3'-phosphoesterase domain [TIGR02778] DNA polymerase LigD, polymerase domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0727399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCCCGACC GGCTGGAGCG ATACCGCGCC ATGCGCGACC CGGGCCGGAC GCCGGAGCCG TTCGGCGGCG GTGCGCCCGG CGAGGACGGA TCCGGCTCGG CGCGGGCGTT CGTCGTCCAG AAGCACGCGG CCCGGCGCCT CCACTGGGAC TTCCGGCTCG AGCTGGGCGG GACGCTGCGG AGCTGGGCGG TGCCGAAGGG CCCCTCCGCC GATCCCTCCG ACCGGCGCAT GGCCATCGAG GTGGAGGATC ACCCGGTCGA GTACGCGGAC TTCGAGGGGA TCATCCCCGC CGGCAACTAC GGCGCAGGGG CGGTGATCGT GTGGGATCGC GGCGCGTGGT GGCCGGTGGG CGATCCCGAG GACGGCCTGG CCCGCGGCAA GCTCGTGTTC CGCCTGAGGG GCCACAAGCT GCGCGGAGAG TGGACGCTGG TCCGGACCCG CGCCGGGGAC GGCGGGAAGC GCCAGTGGCT GCTCCTGAAG CACCGCGGCG ATCCGTTCGC CGGGCCGGGG CGGCCGTTCC CGGAGGCGTC CGTGCTCTCG GGGCGCACCG TGGAGGAGCT CGCGGCCGGC ACGAGCCGGG CCGAGGCCGC CGCCCGCGAG GCCGCGCGCC TCGGCGCGCC GGCGCGTCCG CTCCCGCGGC GGGGGCCCGC GCCGATGGCG CCGGGCGCGC GCCGGGCGCC GTTCGACCGC GCGGGCTGGC TGTTCGAGGT GGCGCAGGGC GGCCAGCGCG TGTCGGCGCG CCGCGAGGGC ACCGGGGCGG TGCTGCGCTC GCCGCAGGGT GAGGACCTCG GGCCGCGCTT CCCGGAGGTG GCGCTCGCCG TGGCGCTCCT GCCCGGCGAT CCGGTGCTCG ACGGCGAGCT GGTGGTGCTC GACGACGAGG GGCGGGCGTC GGCCGAGGCG CTCGAGGCTC GCGCCCGCAC CGGCGCGAGC GCGGCCGCCG GCGCCGCGCT GCAGCGGCCG GCGACGCTGT TCGCGTTCGA CCTCCTGGCC CTGGGTGGGC GCGACCTGCG CGCGCTGGCG CTCGCCGACC GCAAGCGGCT GCTCGCCGAG GTGGCGCCCG CGGTCGGCTC GGTGCGCTTC GCCGGCCACG TCGAGCGCGA GGGGAAGGCG CTCCACCGCG AGGCGGCGGA CCGGGGCCTC CCCGGCGTGC TCGCCCGGCG GGCCGCGGCG CCCTACCGGT CCGGCCGATC CGCCGACTGG GTGCTCGTGC CCGCCGCCCG GAGCGCGGCC CCGCGCCCGC CGGCGCCGCG CCCCCGGGGC GACGCGCCGG CCGCGACCGG CGCCGTCCCG GTGGAACGCA CCGTGAACGT GGTCCATCCG GAGAAGGTCT GGTTCCCGGA GGACGGGATC ACGAAGGGCG AGCTCGTCGC GTACCACCGG GCCATCGCAC CGTTCATGCT GCCGTACCTG GCCGATCGTC CGCTGGTGCT CACCCGGTTC CCGGAAGGCA TCCACGGTCG CAGCTTCCTG CAGGAGGACG CGCCGGCGTG GCGGCCGCGC TGGTTGCGCG CGGCGACGGT GCACGCAGGG GAGGGGGGCC GCACCCTCGA TCACCTCCTG GTGGACGACG CCGACGGCCT CGCCTGGCTG GTGGATCAGG GCGCGATCCC GCTCGACGTG CTGGCGGGCC GCGCCGGCGC GCTGGAGCGG CCGGACTGGT GCGTGCTGGA GCTCGACGCG GGCGACGCGC CGTTCGCGCA GGGGGTGCGG GTGGCGCGCG CGCTCCACGC GCTGTGCGAC GCCGCCGGGC TGCCGAGCCA CGTCAAGACC ACCGGCGAGC GGGGGCTGCA CGTGCTCGTC CCGCTCGGCG GCCAGCTCAC GCACGCGCAG GCCCGCACGC TCGCCGAGCT GCTGGCGCGG ACGGTGGAGG CCGAGCTGCC GGACCTGGCC ACCACCGCCC GCACGGCCGC GGCGCGCGGC GGCCGCGTGC ACGTCGACGC GCTGCGGAAC GGCCACGGCA CCGCCATCGC GGCGCCGTAC ACGGTGCGCC CGAGGCCGGG GGCGCCGGTG TCCACGCCGC TGCGCTGGAG CGAGGTGAAT GCCCGCCTGG ACCCGGCGCG GTTCACCGTG CGCACGGTGC CTGCGCGCGT GGCCCGGCTC GGACGCGATC CGCTCGGGCC GGTCCTGACC GAGCGCCCGG ATCTGCTGCG CGCGCTCGCG CGCCTGCGGG CGCGGCCGGG TGCGGTCGGG TGCGGTCGGC CGGCGCGCAG CGCGCCGTTC GTGACGCGCC GCACGCCTGG GGATGCGACC CGCCGCCGCG CGCGCCGCCT CGTGGTGCCG GCGCGCATGT GGGGACAGGT GGCCGAACCC CGCCCGGGGG GCGACTTTGC GGCAATGTGC CGGCCGACGC GCAATCGTTC GCGCCAATGA
|
Protein sequence | MPDRLERYRA MRDPGRTPEP FGGGAPGEDG SGSARAFVVQ KHAARRLHWD FRLELGGTLR SWAVPKGPSA DPSDRRMAIE VEDHPVEYAD FEGIIPAGNY GAGAVIVWDR GAWWPVGDPE DGLARGKLVF RLRGHKLRGE WTLVRTRAGD GGKRQWLLLK HRGDPFAGPG RPFPEASVLS GRTVEELAAG TSRAEAAARE AARLGAPARP LPRRGPAPMA PGARRAPFDR AGWLFEVAQG GQRVSARREG TGAVLRSPQG EDLGPRFPEV ALAVALLPGD PVLDGELVVL DDEGRASAEA LEARARTGAS AAAGAALQRP ATLFAFDLLA LGGRDLRALA LADRKRLLAE VAPAVGSVRF AGHVEREGKA LHREAADRGL PGVLARRAAA PYRSGRSADW VLVPAARSAA PRPPAPRPRG DAPAATGAVP VERTVNVVHP EKVWFPEDGI TKGELVAYHR AIAPFMLPYL ADRPLVLTRF PEGIHGRSFL QEDAPAWRPR WLRAATVHAG EGGRTLDHLL VDDADGLAWL VDQGAIPLDV LAGRAGALER PDWCVLELDA GDAPFAQGVR VARALHALCD AAGLPSHVKT TGERGLHVLV PLGGQLTHAQ ARTLAELLAR TVEAELPDLA TTARTAAARG GRVHVDALRN GHGTAIAAPY TVRPRPGAPV STPLRWSEVN ARLDPARFTV RTVPARVARL GRDPLGPVLT ERPDLLRALA RLRARPGAVG CGRPARSAPF VTRRTPGDAT RRRARRLVVP ARMWGQVAEP RPGGDFAAMC RPTRNRSRQ
|
| |