| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0721 |
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| Symbol | |
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| ID | 7300443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011891 |
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| Strand | - |
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| Start bp | 810114 |
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| End bp | 812822 |
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| Gene Length | 2709 bp |
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| Protein Length | 902 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643593516 |
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| Product | general secretion pathway protein D |
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| Protein accession | YP_002491142 |
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| Protein GI | 220915838 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.451172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGC TCCTTGCCAC GACGTTGCTC GTCCCGGTGC TCGCCGCCGC GCAGGTCCCG
CTGCGCCCGA CCGACGACCC CGAGTCGCCG GCGCGGCAGC GCCCGCCCAC CACCCGGCCC
ACCTCGCCGC CGACCGGCAT CCCCACCACG CCGCCGCCCC CGGGGACCTC CATCGGTCCG
GGCGGCGTGG CCCCGATCCA GCAGAACGGC GCGCGGCCGC CCGCGGCGCG GCCCACCTCC
CCGGCCCCGC GCCCCGGCGG CGCGGCCACG CCCCCCCCCG CGCCCGCGCG GGGCGGCGGC
GGCGAGGCCG AGACCACGCT GCAGCCGGCG AACGGCAGGT GCGTCCCGAT GCAGGGGCGC
TTCATGCTGA CGTTCAACCG GGCCGAGGTG GTGGACGTGC TCGAGCAGGC GAGCCGCTGG
ACCTGCCGGA ACTTCATCTA CACGGAGGAC GTGGCGCGCG GGAAGATCAC GCTGCTCTCC
AAGACGCCGG TCACCGCGGA GGAGGCGTAC GCCGCGTTCC TGGCCGCGCT GAACGCGAAC
AACATCACGG TGTATCCGAC GGGCCGGTAC TGGCGCCTGG GCCGCGCCGC CGACAGCAAG
AAGATGCCCA TCCCGACGTA CACCGACCCG GAGAGCGGCA CGCCGGCGAG CGAGCAGGTC
ATCACCAAGG TGATCCGCCT GCAGTACGCC GACGCCGACC AGCTCCGCGG CGTGATGGGC
AACTTCATCT CGCCGCAGGG CGCGGACATC CAGTCCATCC CCCCCTCGAC GCTGGTCATC
ACCGACACCG GCCTCAACAT CCGCCGCATC GAGAAGATGA TCGAGGCGAT CGACAAGGTC
GGCGGCGGCG ACCTGGTCCG CATCGTCCAG GTGCGCTACG CGTCCGCCAA GGACCTCGCC
GACAAGGTGA ACCAGATCTT CCAGGCGCAG GGCGGGCGGA GCCCGCGCCC GGCGCGGATC
TCCAGCGGCC CGGCGCGGCC CGGCGTCCCC ACCACCCAGC CCGCGGGCGG CTCGGTCGAG
GTCTCGGTCT ACAAGGTCCT CCCCGACGAC CGCACCAACA AGCTCATCGT CATCGCGGAC
GAGAAGAGCT TCCAGCAGAT CATGGAGCTG GTGCAGCAGC TCGACGTGCC CACCAGCGCC
GACGGCGGCG TCCACGTCCT GTTCCTCAAG AACGCGAACG CGGAGGAGCT CGCCACCACG
CTGTCGAACC TGGCGCAGGG CCAGGCCAAG CGCACCCCCA CGCCCGGCGC GCCGACGCAG
CCGGCCGCGC GACCGGTGGG CATGCCCGGG GCGCCCCCCG CCGCCGCGGC GGCGCCCGCC
CCGGCCGGCG ACGTCACCGC CGAGCTGTTC TCGGGCGAGG TGAAGATCAC CGCCGACAAG
ACGCAGAACG CGCTGCTCGT GCAGGCGAGC GGGGCCGACT TCTCCGCGGT CCAGCGGCTG
GTCGAGAAGC TCGACCGGCC GCGGCGCCAG GTGTTCGTCG AGGCGGTGAT CATGGAGGTG
AACCTCAAGA ACTCCATGGA GCTCGGCGTC AGCGCGCACG GCGCGATCCC CTACAAGTAC
AAGGGGGACA CCGGCGTCAT CCCGCTCTCG TCGCAGACCG GGCGCGTCAA CTCGCTCGAC
ATGTCGAGCG CGATCGCGCT GGGCGGGTTC CTCACCGGCT ACACCGGCCC GATCTCCGCG
GAGCTGAAGG ACCTCGGCTT CGGCAACATC CCCAGCCTCG GCCTGCTCAT CCAGGCGCTG
CAGTCCAACT CCGACGTGAA CGTGCTCTCC ACGCCGCACC TGCTCGCCAC CGACAACGAG
GAGTCGGAGA TCACGGTGGG CCAGAACGTG CCGTTCCAGT CCGGCTACGC GCCCTCCGGG
CTGTCCAACC TGCTCTCCGG CTCCGGCACC GGCGCCAGCA GCACCGTCGG CTCCGCGCTC
GGCACCCAGG GCCTGGGCTC GCTCTACGCG CCCATCCAGC GGCAGAACGT GGAGCTGAAG
CTCAAGATCA AGCCGCAGAT CAACGAGGGC GGGAACATCC GGCTCACCAT CGAGGAGCAG
ACCGAGGAGA TCGCGGAGAA GGACCCGCAG CTCGGCCCGA CCACCGCCAA GCGCAGCGTG
AAGACGCAGA TCGTGGCGCG CGACCAGAGC ACCATCGTCA TCGGCGGGCT CATCCAGGAC
CGCGCCATCC GCAGCGTGTC CAAGATCCCG TTCCTCGGCA GCCTGCCCAT CCTCGGCTGG
CTGTTCCGCG ACACCACCAC GACCAAGCAG AAGGTGAACC TGCTGCTCTT CCTCACGCCG
TACATCATCC GCGACGAGGC GGACTACCGG CGCATCTACG AGAAGAAGCG CGAGGAGCAG
CAGCAGTTCA TCGAGCAGTT CTACGGGCGG CAGCCGCGCT ACGACGTGGA CGTGGACTTC
AGCCGCAAGA CCGGCCCGTA CTCGCGCCTG CGCCGGGGCG TGAGCCAGGA GACCTCGCGG
ATCGAGAACG GCGGCGACGG CGCGCCGGGC GAGTACCTGT CCGCTCCCCC CGCCGGCGGC
CCGCCGCCGA CCACCGTGGT CCCGGTGCCG CGCCCGACCT CGCCCGCGCC CGCGCCCGAG
CCGGAGGCCG CGCCGGACGC GGCGCCGCCG CCCGAGGGCA CGCCCGAGCC GGTGGAGCGG
CTCTCGCCGC AGCAGCCGCC GCCCGCCGCG GAGCCGGCCG CGCCCGGAGG GACCCCACCG
CAGGAATGA
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| Protein sequence | MKKLLATTLL VPVLAAAQVP LRPTDDPESP ARQRPPTTRP TSPPTGIPTT PPPPGTSIGP
GGVAPIQQNG ARPPAARPTS PAPRPGGAAT PPPAPARGGG GEAETTLQPA NGRCVPMQGR
FMLTFNRAEV VDVLEQASRW TCRNFIYTED VARGKITLLS KTPVTAEEAY AAFLAALNAN
NITVYPTGRY WRLGRAADSK KMPIPTYTDP ESGTPASEQV ITKVIRLQYA DADQLRGVMG
NFISPQGADI QSIPPSTLVI TDTGLNIRRI EKMIEAIDKV GGGDLVRIVQ VRYASAKDLA
DKVNQIFQAQ GGRSPRPARI SSGPARPGVP TTQPAGGSVE VSVYKVLPDD RTNKLIVIAD
EKSFQQIMEL VQQLDVPTSA DGGVHVLFLK NANAEELATT LSNLAQGQAK RTPTPGAPTQ
PAARPVGMPG APPAAAAAPA PAGDVTAELF SGEVKITADK TQNALLVQAS GADFSAVQRL
VEKLDRPRRQ VFVEAVIMEV NLKNSMELGV SAHGAIPYKY KGDTGVIPLS SQTGRVNSLD
MSSAIALGGF LTGYTGPISA ELKDLGFGNI PSLGLLIQAL QSNSDVNVLS TPHLLATDNE
ESEITVGQNV PFQSGYAPSG LSNLLSGSGT GASSTVGSAL GTQGLGSLYA PIQRQNVELK
LKIKPQINEG GNIRLTIEEQ TEEIAEKDPQ LGPTTAKRSV KTQIVARDQS TIVIGGLIQD
RAIRSVSKIP FLGSLPILGW LFRDTTTTKQ KVNLLLFLTP YIIRDEADYR RIYEKKREEQ
QQFIEQFYGR QPRYDVDVDF SRKTGPYSRL RRGVSQETSR IENGGDGAPG EYLSAPPAGG
PPPTTVVPVP RPTSPAPAPE PEAAPDAAPP PEGTPEPVER LSPQQPPPAA EPAAPGGTPP
QE
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