Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_0694 |
Symbol | |
ID | 7300416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 778726 |
End bp | 780030 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643593489 |
Product | TolB domain protein |
Protein accession | YP_002491115 |
Protein GI | 220915811 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.659148 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGTCC GCCGTGCCCT CGCCCTCGCC GCGCTCGCGC TGGCCGTCTC CCCCGCGCTC GCCGCGCAGG AGCGCCCCAC CATCGTGGTC GGCTCGCCCG ACTTCCGCCC GCTGCCCATC GCGGTGGCGG CGTTCCAGGG CGAGGGCGAC GCCGGCGCCG CCGCGACCCA GACCGCGGAG GTGGTGCGCG CCGACCTGGT GCTGTCGGGC CTGTTCGACG TGCTCGACCC GCGGGGCTTC CTCGCCGATC CGTCGGAGGG CTTCGCGGCG CCGTCGATCC GGTTCGCGCG CTGGGCCGAC GTGGGCGCGG ACGGCCTCGC CAAGGCGCGC GTGCGCCGCG GACCGGCCGG CCTGGAGGGC GAGCTCCACC TGTACGAGGT CCGCGCCGGG CGCGAGGTGC TGGTGAAGCT GCTGCGCGTG GACGGCGCCG ACGCGCGCTC GCTCGCCCAC CGGATGGCCG ACGAGATCGT GCGCTACTAC ACGCGCGAGC CCGGCATCTT CGCGACGCGC ATCGCCGCGA TCCGCCGCGG CCGCGGCACC TGGGAGCTCG TGACGCAGGA CATGGACGGC GGGAACCAGC AGGTCCTGCT GTCCGAGCGG AGCATCCTCA TGTCGCCGGC GTGGCGCCCG GACGGCCGCG AGATCCTGGT CACCAGCTAC CGGTCCGGCC GGCCGGAGCT GTGGGCCTAC CGCTTCTCCG ACCGCGCGTT CCGCCCGCTG GGCCGCCACC GCAACGCGTT CGGCGGCGTG TACTCGCCCG ACGGCTCCCG CATCGCGTTC ACCGTCAGCG AAGGCAACGT CACCGATCTC TGGGTGATGT CCGCCGACGG CGCCGGCGCG CGCAAGCTCA CCAGCGACCC CGCCATCGAC GTGTCGCCCA CCTGGTCGCC CGACGGCCGC CGCATCGCGT TCGTCTCCGA TCGCTCCGGC ACCCCGCAGA TCTACGTGAT GGGCGCGGAC GGCTCGGGCG CGCGGCGCCT GACGTTCCAG GGCAACTACA ACCAGACGCC GCAGTGGAGC CCTCGCGGCG ACCTGATCGC GTTCACCGCG CGCGACGAGC GCAAGGTGTT CGACGTGTTC GTGGTGTCGC CGGACTCGGG CGCCATCAAC CGCATCACCC AGGACCAGGG GCGCACCAAC GAGGAGCCGT CCTGGGCGCC CAACGGCCGG CTCATGATCT TCCGCACCGA CCGGAACGGC GGGATCCAGC TGGTCGTGTC GGACGCGCGC GGCGACCGCC AGACGCCGGT GACGAGCGGC AAGACCGACC TGGCCGCGCC GGCCTGGGGC CCGCTGGCGC CGTAG
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Protein sequence | MTVRRALALA ALALAVSPAL AAQERPTIVV GSPDFRPLPI AVAAFQGEGD AGAAATQTAE VVRADLVLSG LFDVLDPRGF LADPSEGFAA PSIRFARWAD VGADGLAKAR VRRGPAGLEG ELHLYEVRAG REVLVKLLRV DGADARSLAH RMADEIVRYY TREPGIFATR IAAIRRGRGT WELVTQDMDG GNQQVLLSER SILMSPAWRP DGREILVTSY RSGRPELWAY RFSDRAFRPL GRHRNAFGGV YSPDGSRIAF TVSEGNVTDL WVMSADGAGA RKLTSDPAID VSPTWSPDGR RIAFVSDRSG TPQIYVMGAD GSGARRLTFQ GNYNQTPQWS PRGDLIAFTA RDERKVFDVF VVSPDSGAIN RITQDQGRTN EEPSWAPNGR LMIFRTDRNG GIQLVVSDAR GDRQTPVTSG KTDLAAPAWG PLAP
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