Gene A2cp1_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_0388 
Symbol 
ID7296492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp435719 
End bp438103 
Gene Length2385 bp 
Protein Length794 aa 
Translation table11 
GC content72% 
IMG OID643593182 
Product3-hydroxyacyl-CoA dehydrogenase NAD-binding 
Protein accessionYP_002490811 
Protein GI220915507 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.608179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCGGA TCGAGCGGGT GGCGGTGCTG GGGTCGGGCG TGATGGGCAG CACCATCGCC 
GCGCACCTCG CCAACGCGGG CTTCGGGGTG CTGCTCCTCG ACATCGTCCC GAAGGAGCCG
AACGCCGAGG AGCGGGCGGC CGGCCTCGGG CTCGACAGCC CGGCGGTACG CAACCGCCTC
GCGGCCGCGG CGCGCGCGGG CCTCGAGAAG CTGAAGCCGG CGCCGCTCTA CCTGCCCTCC
TACGCGTCGC GCATCGACGT GGGCAACCTC GAGGACGACC TCCCGCGGCT CGCGAGCTGC
GACTGGGTGG TCGAGGTGGT GCTCGAGCAC CTCGAGGTGA AGCGCCAGCT CCTCGGGCGC
ATCGCCCCGC ACCTCAAGCC GACGGCGGTC CTCACCACGA ACACGAGCGG CCTCTCGGTG
AACGCCATCG CCGACACGTT GCCCGAGGCG CTCCGCCCGC GCTTCCTCGT CACCCACTTC
TTCAACCCGC CGCGCTACAT GCGGCTCGTC GAGATCGTCT CGAGCCGGCA CACCGACCCG
GCCGTCGCGG CGGGCATGGC CGAGCTCATC CGCGTGCGCC TCGGCAAGGG CATCGTCACC
GGCAAGGACA CGCCGAACTT CGTGGCGAAC CGCATCGGCG TGTTCGCCAT GTGCAACGCC
ATCCGGCACA TGGTGGAGCT CGACCTGACC GTCGAGGAGG TGGACGCCAT CGCCGGCCCG
CCCACCGCGC GGCCGAAGAG CGCGACCTTC CGCACCGCCG ACCTGGTGGG CCTCGACACG
CTCCTGCACG TCGCGAGGAA CTCCTACGAG CTGCTGCCGG GCGACTCGCG CCGCGACGAG
TTCAAGCTGC CCGCCTTCCT CGAGCAGATG GTCGCGAAGG GGATCCTCGG CAACAAGTCG
AGGGGCGGCT TCTTCCGGAA GGAGAAGGGC GAGGGCGGCG GCCTCTCGAT CTACGACCAC
CGCAAGGGCG AGTACGTGCC GGCGGCGAAG CCGCGCAGCG CGGCGGTGGA GGCGACGAAG
GGGATCGACG ACCCGGCCCA GCGCCTCCGG GCCGCGCTGG CCGGGAAGGA CAAGGTCGCC
GAGCACGCCT GGCGCAACCT GCGCGACACG CTCCTCTACG CGTTCGAGCG CATCCCGGAG
ATCGCCGACG ACGTGGTGAA CGTGGACGCG GCCATGCGCT GGGGCTTCGG CTGGGACCTC
GGCCCGTTCG AGATGCTCGA CGCCATCGGG GTCCCGGCGT TCGTGACCCG GGCCGCGCAG
GACGGCGTGG CCGTGCCGGA GCGGCTCCGC GGCATCGAGC GCTTCTATGC CGAGGAGAAC
GGGCGGCGCC GCTACCTCGA CCTCGCCGGC GGCGGCTACC GCGACGTGCC GCGCCCGGCC
GACCAGATCG ACCTCGCGGT GCTGGAGAAG TCCGGCGCGG TGGTGGAGCG GAACGCGGGC
GCCTCGGTGC TGGACCTCGG CGACGGCGTC TTCTGCCTCG AGTTCCACAC CAAGATGAAC
GCGATCGGCC CGGACGTGCT CGCCATGGTC CACAAGGCGG TGGCGCGCGC CGAGCGCGAC
GGCCAGGGGC TCGTGATCGC GAACCGCGGC CAGCCGGCGT TCTCGGCCGG CGCGAACCTG
ATGCTCATCG CGGTGGCCAT CGCCGAGGGC GCGTTCGACG AGATCGCGCT CACCATCCGC
GCGTTCCAGA AGGCGATGAT GGCGCTCAAG TACGCGCGGG TGCCGGTGGT GGCGGCGCCG
CACGGGCTGG CGCTGGGCGG CGGCTGCGAG GTGTGCCTGC ACGCCACCGC CATGAACCCG
CTCGCCGAGA CGTACATGGG GCTCGTCGAG ATCGGCGTGG GGCTGCTCCC TGCCGGCGGC
GGCACCAAGG AGATGGCGCT CCGGGCGATC CGGCTCGCCG AGAAGTACGA GATCGACGCC
TCGCCGTTCG TGTTCAAGCA CTTCAACACC GTCGCGCTCG CGAAGGTGAG CGCCTCCGCC
GACGAGCTCG TCGCCATGGG GATGCTCCGC GAGGGCGACG CGGTGACGCT GTCGCCGGAC
CGGCTGGTGC ACGACGCGAA GCAGAAGGCG CTGGCGCTGG CCGCGAACTT CCGGCCGGGC
ACGCCCGCGA CCGGCCTGCG CGCGCCGGGC CGCGGCGCGG CGGCGAGCAT CGCCTCCCAG
CTCTGGAACA TGCGCATGGG CGGCTTCATC ACCGAGTACG AGGAGCGGCT CGGCCGCACC
ATCGCCGGCG TCATGACCGG CGGCGACGTG CCGGCCGGCA CGCTCGTCAC CGAGCAGGAC
CTGCTCGATC TCGAGCGCGA GGCGTTCCTG AAGCTGTGCG GCGAGCGGAA GACGCTCGAG
CGCATCCAGC ACATGCTGAA GAAGGGCAAG CCGCTCCGGA ACTAG
 
Protein sequence
MDRIERVAVL GSGVMGSTIA AHLANAGFGV LLLDIVPKEP NAEERAAGLG LDSPAVRNRL 
AAAARAGLEK LKPAPLYLPS YASRIDVGNL EDDLPRLASC DWVVEVVLEH LEVKRQLLGR
IAPHLKPTAV LTTNTSGLSV NAIADTLPEA LRPRFLVTHF FNPPRYMRLV EIVSSRHTDP
AVAAGMAELI RVRLGKGIVT GKDTPNFVAN RIGVFAMCNA IRHMVELDLT VEEVDAIAGP
PTARPKSATF RTADLVGLDT LLHVARNSYE LLPGDSRRDE FKLPAFLEQM VAKGILGNKS
RGGFFRKEKG EGGGLSIYDH RKGEYVPAAK PRSAAVEATK GIDDPAQRLR AALAGKDKVA
EHAWRNLRDT LLYAFERIPE IADDVVNVDA AMRWGFGWDL GPFEMLDAIG VPAFVTRAAQ
DGVAVPERLR GIERFYAEEN GRRRYLDLAG GGYRDVPRPA DQIDLAVLEK SGAVVERNAG
ASVLDLGDGV FCLEFHTKMN AIGPDVLAMV HKAVARAERD GQGLVIANRG QPAFSAGANL
MLIAVAIAEG AFDEIALTIR AFQKAMMALK YARVPVVAAP HGLALGGGCE VCLHATAMNP
LAETYMGLVE IGVGLLPAGG GTKEMALRAI RLAEKYEIDA SPFVFKHFNT VALAKVSASA
DELVAMGMLR EGDAVTLSPD RLVHDAKQKA LALAANFRPG TPATGLRAPG RGAAASIASQ
LWNMRMGGFI TEYEERLGRT IAGVMTGGDV PAGTLVTEQD LLDLEREAFL KLCGERKTLE
RIQHMLKKGK PLRN