Gene A2cp1_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_0344 
Symbol 
ID7296448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp384969 
End bp387260 
Gene Length2292 bp 
Protein Length763 aa 
Translation table11 
GC content69% 
IMG OID643593139 
ProductM6 family metalloprotease domain protein 
Protein accessionYP_002490769 
Protein GI220915465 
COG category[S] Function unknown 
COG ID[COG4412] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03296] M6 family metalloprotease domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCACCT CACGCACCAC CACGCTGGCC TTGCTCGCGG CGCTGGCGCT CGCGCCATCG 
GCCGCGTTCG CCGCGTCCGA CGAGCCGCAG CTCCCGGACG TCGCCGCGAC GACCGACAAC
CCATCGCACC CGCTCGGCGA CGCGCAGGCG GCGCGCAAGG CGATCGCGAT CCAGGCGAAG
CTCAGCGGGA AGACGAAGGG CAAGACGCAC CAGGTGGCAC GCGGCCAGTA CGTCGAGCTG
GAGCGGCAGG GCGAGGATCG GATCTGGACG GTGGTGGGCG AGTTCGGCGA GCAGGTGAAC
CCGACCTACG GCGGCACCGC CGGCCCGCTG CGCAACCAGA TCCCCGAGCC CGACCGAACG
GTGGACAACG TCACCATCTG GGCCCCGGAC TTCAGCCGCG CGTACTACGA GGACCTGCTC
TTCTCGGACG CGCCCGGCGA CGTCTCGATG CGGAACTTCT ACAAGGAGCT CTCCTCGAAC
CGCTACACGG TGAACGGCGA GGTCACCGAC TGGGTGAAGG TCCCGCTCAA CGAGGCCAAC
TACGGCTCGA ACTACTGCGG CGGCATCGTG TGCGCCCGCA CCTGGCTGTT CGTCCGTGAC
GCGGTGAACG CCTGGTACAA CGGGCAGATC GCGGCCGGCC GGACGGTGGC GGAGATCAAC
GCCTACCTGG CGCAGTACGA CGTCTGGGAT CGCTACGACT ACGACGGCGA CGGCAACTTC
AACGAGCCGG ACGGCTACAT CGATCACTTC CAGGCGATCC ACGCGGGCGA GGGCGAGGAG
ACCGGCGGCG GCGCGCAGGG CGACGACGCG ATCTGGAGCC ACCGCTGGTA CGCCTTCTAC
AACAACATCG GCGCCACCGG CCCGGCGTTC AACCGGTACG GCGGGATCCG GATCGGCGCG
AGCGACTTCT GGATCGGCGA CTACACCATC GAGCCGGAGA ACGGCGGCGT GGGCGTGTTC
GCCCACGAGT TCGGCCACGA CCTCGGCCTG CCCGACCTCT ACGACACCTC CGGCAACACC
GGCGGCGCGG AGAACTCGAC CGGCTTCTGG ACGCTGTACT CGGTGGGCTC CTACGGCGCC
TCGGGGCGGC CGGAGGACGG CCTGGGCACG AAGCCGATCC ACATGAGCGC CTACGAGAAG
ATCTTCCTCG GCTGGTCGAA CTACCAGGTG GTGCGCGCCG GGCAGTACGC GTCGCTGAAG
CTCGGCCCGG CGGAGGCGAA CACGAAGCAG GCGCAGACGC TGGTGGTGCT GCTGCCGGAC
AAGATCGTGG AGAGCGAGAT CGGGACGCCG TACGCCGGCA CGTACTTCTA CCACTCCGGC
TCCGGCAACG GCCTCGACCA CTCCATGACG CGCCAGGTGA CGCTGCCCGC GGGCGCGTCG
CTCGCGGCCA AGGTGAAGTT CGACATCGAG CTGGACTGGG ACTACGCGTA CCTGACGGTG
AACGGCGCGC CGGTCGCCAC CAACCTGTCG AGCTCGACGA ACCCGAACGG CCAGAACTTC
GGCAACGGGA TCACCGGCTC GACCGGCGGG GCCTGGGTGG ACCTCACCGC CGACCTGTCC
GCGTGGGCGG GCCAGACCGT GACGCTCGGG TTCCGCTACT GGACCGACGT GGCGGTGGCC
GAGGCGGGCC TGTCGATCGA CGACGTCGCG ATCTCCGGCC AGCCGCTGGA CGGCGCGGAG
ACCGATCCGG GCTGGACCTA CGACGGGTTC GTCCGCACGA ACGGCACGCT CGCGACGCCG
TTCTTCAACG CGTACTTCGC CGAGTACCGG CAGTACCGCG GCTACGACCA GTCGCTGAAG
ACCGGGCCGT ACACGTTCGG CTACCTGAAC GACCCGACCC TGCAGAACTG GGTGGACCAC
TTCCCGTACC AGGACGGCCT GCTGGTCTGG TACTACGACA CGTCGTTCGA GGACAACAAC
GTGGGCGACG CCTGCGCGAG CGGCCGCTGC GGCGGCCTGT TCCTGCCGGT GGACGCGCAC
CCCGGGTTGA TCCTCCGCCC GGACAACGGG AAGGCGTGGC GCCCGCGCTT CCAGGCCTTC
GACTCGACGT TCGGCCTCGA GCCGACCGAC GTGGTGTGCC TGCACGCGAA CAGCCAGCAG
GGCTGCTTCG GCGGCCAGCC GGGCAACCCG CTCTTCGACG ACACGCAGAG CTACTGGGTG
CCGCCGGATC CCTCGCTCAA CCACTCCGGC TGGTCGAGCG TGATCGTGCC GAACACCGGG
ACCACCATCC GCGTGGTCGG GACGTCGGCG CAGGGTGACT TCATGCAGGT GGTGGTCGCG
CCGAAGCGCT AG
 
Protein sequence
MRTSRTTTLA LLAALALAPS AAFAASDEPQ LPDVAATTDN PSHPLGDAQA ARKAIAIQAK 
LSGKTKGKTH QVARGQYVEL ERQGEDRIWT VVGEFGEQVN PTYGGTAGPL RNQIPEPDRT
VDNVTIWAPD FSRAYYEDLL FSDAPGDVSM RNFYKELSSN RYTVNGEVTD WVKVPLNEAN
YGSNYCGGIV CARTWLFVRD AVNAWYNGQI AAGRTVAEIN AYLAQYDVWD RYDYDGDGNF
NEPDGYIDHF QAIHAGEGEE TGGGAQGDDA IWSHRWYAFY NNIGATGPAF NRYGGIRIGA
SDFWIGDYTI EPENGGVGVF AHEFGHDLGL PDLYDTSGNT GGAENSTGFW TLYSVGSYGA
SGRPEDGLGT KPIHMSAYEK IFLGWSNYQV VRAGQYASLK LGPAEANTKQ AQTLVVLLPD
KIVESEIGTP YAGTYFYHSG SGNGLDHSMT RQVTLPAGAS LAAKVKFDIE LDWDYAYLTV
NGAPVATNLS SSTNPNGQNF GNGITGSTGG AWVDLTADLS AWAGQTVTLG FRYWTDVAVA
EAGLSIDDVA ISGQPLDGAE TDPGWTYDGF VRTNGTLATP FFNAYFAEYR QYRGYDQSLK
TGPYTFGYLN DPTLQNWVDH FPYQDGLLVW YYDTSFEDNN VGDACASGRC GGLFLPVDAH
PGLILRPDNG KAWRPRFQAF DSTFGLEPTD VVCLHANSQQ GCFGGQPGNP LFDDTQSYWV
PPDPSLNHSG WSSVIVPNTG TTIRVVGTSA QGDFMQVVVA PKR