| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0281 |
|---|
| Symbol | |
|---|
| ID | 7298983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 315182 |
|---|
| End bp | 316831 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643593076 |
|---|
| Product | methylmalonyl-CoA mutase, large subunit |
|---|
| Protein accession | YP_002490706 |
|---|
| Protein GI | 220915402 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
|---|
| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0034305 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGACG AGAAGAAGCA GCGGTGGCTC GAGGGCACCT ACGCGAAGGC GGTGAAGAAG
GGGCCCGAGC GGCGCCCGCG CTTCGAGACG AGCAGCGGCA TCCGCGAGGA GCCGGTGTAC
GGCGCGGCCG ACGTGCGCCC CGGCCTCGAC GAGCGGCTGG GCCTGCCCGG CGAGTACCCG
TTCACCCGCG GCGTGCAGCC CACCATGTAC CGCGGCCGCT TCTGGACCAT GCGGCAGTAC
GCCGGGTTCG GCACCGCCGA GGAGTCGAAC AAGCGCTACC GCTACCTGCT CGAGTCCGGC
CAGACCGGCC TCTCGGTCGC GTTCGACCTG CCCACGCAGA TGGGCCGCGA CTCCGACCAC
CCCCGCGCCC GCGGCGAGGT GGGCAAGGTG GGCGTGGCCA TCGACTCGAT CCGCGACATG
GAGGTGCTGT TCGACCGGAT CCCGCTCGGC GAGGTCTCCA CCTCGATGAC CATCAACGCG
ACCGCCGGGA TGCTGCTCGC GATGTACCAG GCGGTGGGCG AGAAGCAGGG GGCCGCGCCG
GCGGTGCTGC AGGGCACCAT CCAGAACGAC ATCCTGAAGG AGTACGCGGC GCGCGGGACG
TACATCTACC CGCCGGAGCC GTCGCTGCGG ATCATCACCG ACATCTTCGC CTACACCGCG
AAGGTGATGC CGCGCTGGAA CCCCATCTCC ATCTCCGGCT ACCACATCCG CGAGGCCGGC
TCGACCGCGG TGCAGGAGGT GGCCTTCACG CTCGCCGACG GCATCCAGTA CGTGGACGCG
GCGGTGAAGG CGGGCCTCGA CGTGGACGCG TTCGCGGGCC GGCTCTCCTT CTTCTTCAAC
GCGCACAACG ACCTGCTGGA GGAGGTGGCG AAGTTCCGCG CCGCGCGCCG GCTCTGGGCG
CGCATCATGA AGGAGCGGTT CAAGGCGAAG GACCCGCGCT CGATGATGCT GCGGTTCCAC
ACCCAGACCG CCGGCTCCAT GCTCACCGCG CAGCAGCCGG ACAACAACAT CGTGCGCGTC
ACCCTCCAGG CGCTGGCGGC GGTGCTGGGC GGCACGCAGT CGCTGCACAC CAACTCGCGC
GACGAGGCGC TCGGGCTGCC CACCGAGGAC TCGGTGCGCA TCGCGCTCCG CACGCAGCAG
ATCATCGCGA ACGAGTCGGG CGTCGCCGAC GTCATCGACC CGCTCGGCGG CAGCTGGGCC
ATCGAGGCCA TGACCGACGA GATCGAGGGG CGCGCCCAGG AGTACATCCG GAAGATCGAC
GAGCTGGGCG GCATGGTCCA CGCGATCTCG AAGGGCTACG TGCAGCGCGA GATCCAGGAG
GCCGCCTACG CCTGGCAGCG CCAGGTCGAG GCGAAGGACC AGGTGGTCGT CGGCGTGAAC
GCGTTCAGGT CGGACGATCC GCCGGTGCCG GTGATGAAGG TCGATCCGGC GCTGGAGGCG
CAGCAGGTGG AGCGGCTGAA GGCGCTCCGC GCCGCCCGCA GCGCCTCGGC CGCGCGCGGC
GCGCTCGACG CGGTGCGGGC CGGCGCCCGC GGGACCGACA ACCTCATGCC GCTCATCCTC
GCCGCCGTGA AGGCCGAGTG CACGCTCGGG GAGATCTCCG ACGCGCTGCG CGAGGTCTAC
GGCGAGTACC GGGAGACGGT GGTACTCTAG
|
|---|
| Protein sequence | MADEKKQRWL EGTYAKAVKK GPERRPRFET SSGIREEPVY GAADVRPGLD ERLGLPGEYP
FTRGVQPTMY RGRFWTMRQY AGFGTAEESN KRYRYLLESG QTGLSVAFDL PTQMGRDSDH
PRARGEVGKV GVAIDSIRDM EVLFDRIPLG EVSTSMTINA TAGMLLAMYQ AVGEKQGAAP
AVLQGTIQND ILKEYAARGT YIYPPEPSLR IITDIFAYTA KVMPRWNPIS ISGYHIREAG
STAVQEVAFT LADGIQYVDA AVKAGLDVDA FAGRLSFFFN AHNDLLEEVA KFRAARRLWA
RIMKERFKAK DPRSMMLRFH TQTAGSMLTA QQPDNNIVRV TLQALAAVLG GTQSLHTNSR
DEALGLPTED SVRIALRTQQ IIANESGVAD VIDPLGGSWA IEAMTDEIEG RAQEYIRKID
ELGGMVHAIS KGYVQREIQE AAYAWQRQVE AKDQVVVGVN AFRSDDPPVP VMKVDPALEA
QQVERLKALR AARSASAARG ALDAVRAGAR GTDNLMPLIL AAVKAECTLG EISDALREVY
GEYRETVVL
|
|---|
| |