Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_0269 |
Symbol | |
ID | 7298971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 300497 |
End bp | 301498 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 81% |
IMG OID | 643593064 |
Product | RDD domain containing protein |
Protein accession | YP_002490694 |
Protein GI | 220915390 |
COG category | [S] Function unknown |
COG ID | [COG1714] Predicted membrane protein/domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00578779 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTGTTCT GTGCCGGCTG CGGCGCGCCG CTCGCGCTCG CGCCCGAGCC GCCGCCGCGG GCGCTCGACG CCTCGCTCAG CATCGACCGC CGCGGCGACG CGAGACCGCC CGGCACGCCG CCGCCGCTCC GCGGCGCGCC GCCGCCGCCC GCCTCGGCCG CCGACACGTT CGTGTTCGGC CTGCCCGCGA TGCCGCCCGC GGCGCCGGTG CCCACGGCGC CGGCGCGCAC GGGCCGGGCG CGCGAGGTCG ATCGCTCCGG CTGGGATCTG GGGCCCCCGC TCGGCGTGCG ACAGCCGGAC GCACCGCCCC CGCAGGCGGC CGTGTCCGCC GCGGACACTT CGGACGACGA CTTCGAGTTC GGCCCGCTCC CCGACCTGCG GGCGGAGCCG GCCCGCGCGC TGCCCCCGCC GGCGGCCGCG TTCGCGAGGG CGCTCGAGGT CGATCGCGAG GTCCTGGGCG CGCCCGCCGC GCCCGCGGCG GTGCCGGCGC TCGAGGCCGC GCCCGACGAG GCGATCGACG TCGACGTGGA CGCGGTCGAG GTCCACCTGC GGCGCCCGGC CACCTGGCGG CGCGCCGCCT CGTGGGCGAT CGACGTCCTG CCGTTCGCGG CGCTCGCGAT CTGGGCGCTG CAGGCCATCG CCGGCGCGGT GCCGCTCGCG CCCGGCGAGC CGGGCGGCCC GGCGCACGCG CTCGACCTGG CGCTCCGCGA CGGCGGCGCC ATCGCGCTTC CGCTCGCGGC GGGCGCGGTC ATCCTGGGCC TCGTGTACCA GACGCTGGGC CACGCGCTCG CGGGCGCCAC CCTGGGCAAG CTCGCGCTCG GGCTGCGGGT GGTCGGCCCG GACGGGCGGC GCCCGACGCT GGCGCGGAGC GCGGCGCGGG CGGCGCTGTC CGCCGCGTCG GTGCTGCTGC TCGGGCTGGG GCTGCTCGCG GCGCTGTTCA CGCGCAGCGG ACGGTCGCTG CACGACCTCG CGGCGGGCAC CTGGGTGGTC GAGGCGCCTT GA
|
Protein sequence | MVFCAGCGAP LALAPEPPPR ALDASLSIDR RGDARPPGTP PPLRGAPPPP ASAADTFVFG LPAMPPAAPV PTAPARTGRA REVDRSGWDL GPPLGVRQPD APPPQAAVSA ADTSDDDFEF GPLPDLRAEP ARALPPPAAA FARALEVDRE VLGAPAAPAA VPALEAAPDE AIDVDVDAVE VHLRRPATWR RAASWAIDVL PFAALAIWAL QAIAGAVPLA PGEPGGPAHA LDLALRDGGA IALPLAAGAV ILGLVYQTLG HALAGATLGK LALGLRVVGP DGRRPTLARS AARAALSAAS VLLLGLGLLA ALFTRSGRSL HDLAAGTWVV EAP
|
| |