| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0190 |
|---|
| Symbol | |
|---|
| ID | 7298425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 211354 |
|---|
| End bp | 212502 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 643592985 |
|---|
| Product | peptidase dimerisation domain protein |
|---|
| Protein accession | YP_002490615 |
|---|
| Protein GI | 220915311 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0831507 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCTC GCATCGAGGA CGCGCTCACC TGGCTGCAGG GACAGCGCGG CGCCATGGAG
GCGCTGCTGG AGCGCCTGGT GGCGCAGAAC TCCTTCACGC AGAACCGCGC CGGGGTCGAG
GCGGTCGCGA ACGTGGTGGC GGGGCAGCTC CGCACGCTCG CCATGGACGT GGAGCTGCGC
CCCTCGCACC ACTACGGACC GCACGTCCTG TTCACCGGCC GCGCCGCGGG CGCGCCGGTG
TTCCTCCTCG GCCACACCGA CACGGTGTTC CCGCCGGGCA CGTTCGAGGG CTTCCGCCGC
GACGGCGACC GGGCGCGGGG GCCGGGCGCC TTCGACATGA AGGGCGGCAT CGTGGCGATG
CTGTTCGGGC TGGCCGCGGC GAAGCGCGCC GGGCTGCTGG AGCGGGTCGC GGTGCGGGGC
GTGCTCGTCT CCGAGGAGGA GGTGGGCTCC CCCGAGTCGC AGGCGGTGAT CCGCGCCCAC
GCGGCGGGCG CCGCCTGCGC GCTCGGCTTC GAGTCCGGGC GCCCGGGCGA CCTGGTGGTC
ACCCGCCGCA AGGGCGTGGC GTCGGTGCGG GTCGAGGCGC GCGGGGTCGC GGCGCACTCC
GGGAACGAGC ACGAGAAGGG CCGGAGCGCG ATCTGGTCGC TGGCGCGGTT CGTCGATCGC
GCCCAGGCGC TCACCGACTA CGCGCGCGGG CTGACCGTGA ACGTGGGGAC CATCGCCGGC
GGCACCACCA AGAACACCGT GCCGGCCTCG GCCTCGTGCG AGGTGGACCT GCGCTTCGAG
ACGGTGGCGG ACGGGCAGGC GCTGCGCGAG GCGGTGGAGG CGGCCGCGCG GGAGGCCGCC
ATCCCCGGGA CGGAGCTCGA GGTGACCGCG GGCGCCTGGC GCGATCCGCT GGAGCGCACC
CCGGCCTCGT CGGCGCTCGC GAAGGAGTAC GGCGACTGCC AGCGCGAGTG CGGCCTGGGC
CAGGGCGAGG CCCCGCTCGC CGGGGGCGGC TCCGACGCCT GCACCACCGG CGCGCTCGGC
ATCCCCACCA TCGATGCGCT CGGCCCCCGC GGCAAGGCGT TCCACACGCC CGGCGAGGAG
GTGGACCTCG GCTCGCTGGT GCCGAAGGCG AGCGCGCTGG CGCGCTTCCT GGCGCGGCGC
GCGGGCTGA
|
|---|
| Protein sequence | MAARIEDALT WLQGQRGAME ALLERLVAQN SFTQNRAGVE AVANVVAGQL RTLAMDVELR
PSHHYGPHVL FTGRAAGAPV FLLGHTDTVF PPGTFEGFRR DGDRARGPGA FDMKGGIVAM
LFGLAAAKRA GLLERVAVRG VLVSEEEVGS PESQAVIRAH AAGAACALGF ESGRPGDLVV
TRRKGVASVR VEARGVAAHS GNEHEKGRSA IWSLARFVDR AQALTDYARG LTVNVGTIAG
GTTKNTVPAS ASCEVDLRFE TVADGQALRE AVEAAAREAA IPGTELEVTA GAWRDPLERT
PASSALAKEY GDCQRECGLG QGEAPLAGGG SDACTTGALG IPTIDALGPR GKAFHTPGEE
VDLGSLVPKA SALARFLARR AG
|
|---|
| |