| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0149 |
|---|
| Symbol | |
|---|
| ID | 7299791 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 165911 |
|---|
| End bp | 168091 |
|---|
| Gene Length | 2181 bp |
|---|
| Protein Length | 726 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643592944 |
|---|
| Product | glycoside hydrolase family 57 |
|---|
| Protein accession | YP_002490574 |
|---|
| Protein GI | 220915270 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00221085 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCCG TCCGCCTCGC GTTCCTCTGG CACATGCACC AGCCCCCCTA CCGCGAGCCG
GAGACGGGCG CGTACCTCAT GCCGTGGGTC CGGCTGCACG CCACCCGCGC CTACCACGAC
ATGGCCTGGA TGCTGGAGCG CCATCCGGGC GTGCGCTGCA CCGTGAACTT CACCCCGGTG
CTGCTCGAGC AGCTCGAGGA CTACGCGCAG GGGACCGCGC AGGACCGCCT GCTGGAGCTG
AGCGCACGCC CGCCCGCCGA TCTCGGCGCC GAGGATCGCC AGCAGATCCT GCGCTCGTTC
TTCATGGTCG GCTGGGAGAC GAACGTGAAG CCCTTGCCGC GCTACTGGGA GCTGCTCCAG
AAGCGCGGGC GGGAGCTGCG CGGGGTGGAC CTGGCCCGGC TCGCGCACTC GTTCGGCGAC
CAGGAGCTGC AGGACCTCCA GGCGCTGTTC AACCTCGCCT GGATGGGCTT CGCGGCGCAG
GCCGACGAGC CGGCGGTGCG GGCGCTGCGG GAGAAGGGGC GGGGCTACAC CCGCGCCGAC
GTGGACGCGC TGCTCGAGGT GCAGCGGCGC ATCGCGGCGG GCGTCGTGCC GCGCTGGCGC
GCGCTGCAGG ACCGCGGGCA GGTGGAGCTC TCCACCACGC CGTACTACCA CCCCATCCTC
CCGCTGCTCT GCGACACCGA CGCCGCGCAC CGCGCGCTGC CCGGCATCCC GCTCCCCCCG
CGCTTCGCCC ACCCCGAGGA CGCGCGCTGG CACGTGCGCG AGGCGATCGC CGCGCACGCG
CGCCGCTTCG GGCGGCCGCC CGCGGGCATG TGGCCGGCCG AGGGCTCGGT CTCGCCGGAG
GCGCTCGAGA TCCTGGCCTC CGAGGGCGTG GGCTGGGCGG CGAGCGACGA GGGCGTGCTG
CTGCAGTCCC TGCCGGCGGC GGCGCCGCGC CTGCGCTCGG TGTACCGGCC CTGGCGCGTC
GCGGCCGGCG CGGGGCGCGA GGTCCGGATG CTGTTCCGCG ACCGCGCGCT CTCCGACGTC
ATCGGCTTCA CCTACGCGAA GGTCCCGGCG CGGGACGCGG TGGCGGACTT CACCGCGCAC
GTGCGGGCGG TGGCCGACGC GTGGGCGCGC GACGGGCAGC CCGGCGCGCC GACGCTGGGC
GTGTTCCTCG ACGGCGAGAA CGCCTGGGAG CACTACCCGA GCTCGGGCCA CGAGTTCCTC
GACCGGCTCT ACGACGCGCT GGAGCGCTCC GACCGCGTGC AGACGGTGAC GCTGTCCGAG
GCGACCGCCG CCGCCGAGGG CCCGCCCATC GCGCGCGTCC ACACCGGCTC CTGGATCGAG
GCCTCCTTCC GGATCTGGAT CGGCCACCGC GAGGACCGCG AGGCGTGGGC GGCGCTGGGC
CGGGTCCGCG ACGCGCTCGC GCAGGCGGAG GAGCGCGGCG AGGTCCCGGC CGAGCGGCTC
GCCCGCGCGC GCCAGCACCT GTACGCCGCC GAGGCGTCGG ACTGGTACTG GTGGTACGGC
GAGGACTTCA CCACCGAGCA GGCGGCGGAG TTCGACGCGC TGTTCCGCGC GCACGTGAAC
CGGGCGGCGC TGCTCTGCGG CGTGGACCCG CCGCCGGAGA CGCAGGCGCC CATCAAGCGC
GCCGGCGCGC CGGCCCCGGG CGCGCTCGAG GCGAAGCCGC TCCGCGAGCC GGTGATGCTG
CTCACGCCGA CCCTGGACGG CCGCGAGACG ACCTACTTCG AGTGGCAGGG CGCCGGGCTG
TACCGGCCCG GCCAGCACCG CGGCTCGATG TACGGCGGCG CGCAGGCGTT CCACGTGCTC
CGCTTCGGCT TCGACCTCGC CGCGCTCTAC CTGCGGCTCG ATCCGGCCGA GTCCGCGGCG
CGCGCCGCCG AGGTCGCGAC GCACGTGCGC GTGTCGGTGC GCTCCCGGGA CGGTCAGCGC
TGGGTGGACT TCCCGCTCGA GCCGGACGGC GCGCCCCGCC CCGGCGCGTG GCGCGGCCAG
GCGCTCGGCC GGCTCGCGTT CGCGCAGGTC GCGGAGCTCG AGCTGCCGTT CGCCGCGCTG
GGCCTCGCGC CGGGCGACCG GGTCGACCTC GCCGTCCACG CGCTCCGGGG CGAGGTCGAG
GTGGAGCGGC TGCCGCGCTA CGGCTACCTC GCGCTCACCG TGCCCGACCA GGACTTCGAG
CGCATCCACT GGCGGGTGTA G
|
|---|
| Protein sequence | MTPVRLAFLW HMHQPPYREP ETGAYLMPWV RLHATRAYHD MAWMLERHPG VRCTVNFTPV
LLEQLEDYAQ GTAQDRLLEL SARPPADLGA EDRQQILRSF FMVGWETNVK PLPRYWELLQ
KRGRELRGVD LARLAHSFGD QELQDLQALF NLAWMGFAAQ ADEPAVRALR EKGRGYTRAD
VDALLEVQRR IAAGVVPRWR ALQDRGQVEL STTPYYHPIL PLLCDTDAAH RALPGIPLPP
RFAHPEDARW HVREAIAAHA RRFGRPPAGM WPAEGSVSPE ALEILASEGV GWAASDEGVL
LQSLPAAAPR LRSVYRPWRV AAGAGREVRM LFRDRALSDV IGFTYAKVPA RDAVADFTAH
VRAVADAWAR DGQPGAPTLG VFLDGENAWE HYPSSGHEFL DRLYDALERS DRVQTVTLSE
ATAAAEGPPI ARVHTGSWIE ASFRIWIGHR EDREAWAALG RVRDALAQAE ERGEVPAERL
ARARQHLYAA EASDWYWWYG EDFTTEQAAE FDALFRAHVN RAALLCGVDP PPETQAPIKR
AGAPAPGALE AKPLREPVML LTPTLDGRET TYFEWQGAGL YRPGQHRGSM YGGAQAFHVL
RFGFDLAALY LRLDPAESAA RAAEVATHVR VSVRSRDGQR WVDFPLEPDG APRPGAWRGQ
ALGRLAFAQV AELELPFAAL GLAPGDRVDL AVHALRGEVE VERLPRYGYL ALTVPDQDFE
RIHWRV
|
|---|
| |