Gene A2cp1_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_0017 
Symbol 
ID7296659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp21051 
End bp22295 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content69% 
IMG OID643592814 
Productintegrase family protein 
Protein accessionYP_002490444 
Protein GI220915140 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCGAGC ACCTCTTCCG GAAGTCGTGC CAGAAGAACG GGTGGTACTA CGGCTGGTTC 
TACGGCCCGG ACGGCAAGCG GGTCACTCGC TCCCTCCGGA CGGCCGACCG CCGCATCGCC
CGCGACCGCC TCCGCCAGTT CGAGCGGGAG GCCCATGCTT CGGGTGGTGC GGCCTCGAAC
GCGGCCCCGC ACACCGTAGA GGACACCGTC CGCTTCATCG TGGAGGTTGG CTGCTCGGAC
CGCGCCGAGG GGACGCTGGA GATGTACGCG AAGAAGGGCG GCCATCTGGT CCGCGTCTTC
GGCGATCAGC AGGTCCACGC GCTCTCGCTC GACAAGGTGC AGGACTACAT CAACCAGCGG
CTGGGTGAGG GAGCGGCCCG AGAGACGGTG CGGAAGGAAC TCTCGACCCT CCGCGTCGCC
CTGGAGACGG CGAAGGCCCG CAAGCTCTAC GTGGGCGACC CGCGCTCGAT CTTCCCACCG
TTCCGCGTGA CGTACCGGCC GCGCGAGCGG CACCTCTCCG TCGAGGAGTT CGGGAAGCTC
CTCGCCGTGC TCGACGCGAA GCGGCGGCGC TGGATCATGG TGGCGGTCTA CTCTGGGGCG
CGCCGATCCG AGGTCGAGGC GCTGCGGTGG GACACGCACG TCAACCTGGA GACGGGCTGG
CTCGTGCTCC CGGGCACGAA GACCGCGAAG GCGCGGCGCT CGGTTCCGAT CCTGCAGCCG
CTGGCCGACG AACTCGCAAG CGACCCGTCG AAGAAGGGCT TCGTCGTGGA GGCGTGGGCG
AACGTCGGCC GAGACCTGCG GATCGCGTGC GCGCACGCGG GCGTGGCCCG CGTGAGCCCG
AACGACCTGC GCCGGACCTT CGCGTCGTGG ATGAAGCAGC AGGGCGAGGA CTCGGCCGTC
GTCGCGAAGC TCCTGGGCCA CGCCTCGACG CGCATGGTGG ACCTCGTGTA CGGCCGCTTG
AACGACGAGA ACCTCCGCCG CGCGGTCGCG AAGCTCCCGT CCGTCGCCGT GCCCAGCGTC
GGAAGCACAT CGGAAGCAGC ACTGGGTCGA CTCGTGGGAG AGGAGGGACT CCTGGGAACC
GGAGCGCCTC CCGTTGTGGC GGAGAACCTG CCACACGAAA ATCAGAAGGC CCGCCAGATC
TCGCGATCTG GCGGGCCACG ATGGTGTTCG AGCTCGGAAG GAGTGCCTGG GGCCGGAATC
GAACCAGCGA CACGGGGATT TTCAGTCCCC TGCTCTACCG ACTGA
 
Protein sequence
MGEHLFRKSC QKNGWYYGWF YGPDGKRVTR SLRTADRRIA RDRLRQFERE AHASGGAASN 
AAPHTVEDTV RFIVEVGCSD RAEGTLEMYA KKGGHLVRVF GDQQVHALSL DKVQDYINQR
LGEGAARETV RKELSTLRVA LETAKARKLY VGDPRSIFPP FRVTYRPRER HLSVEEFGKL
LAVLDAKRRR WIMVAVYSGA RRSEVEALRW DTHVNLETGW LVLPGTKTAK ARRSVPILQP
LADELASDPS KKGFVVEAWA NVGRDLRIAC AHAGVARVSP NDLRRTFASW MKQQGEDSAV
VAKLLGHAST RMVDLVYGRL NDENLRRAVA KLPSVAVPSV GSTSEAALGR LVGEEGLLGT
GAPPVVAENL PHENQKARQI SRSGGPRWCS SSEGVPGAGI EPATRGFSVP CSTD