Gene Mnod_8104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_8104 
Symbol 
ID7295664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011887 
Strand
Start bp327490 
End bp328554 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content69% 
IMG OID643592624 
Productsecretion protein HlyD family protein 
Protein accessionYP_002490256 
Protein GI220914948 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCTTTG GCCTGGCCGG AGCCGCTTTC TGGTTTTGGT CGCCGCAGGT CGGCGAACTG 
GCCGGGCGGT ATTCGTGGTG GAGCACGCTC CGCTCCGTAC CCGCGCTGTC ATGGCTGCCT
GGTCCTCGCG CGGCAGCTGA AGGCCTCGTG CTTCAAGGGA ACGTGGAGGT CCGGCAGGTC
AACCTGGGCT TCAAGGTTGG GGGCCGCATC GCGAGTCTGG CCGTCGACGA GGGCGCCACG
GTCCGCGAAG GTCAGAGCCT TGCCAGCCTC GAGAAGGTCT ATTTCGAGGA TGCCGTTGCG
CAAGCCCGCG CGCAGCGCGA CCAAGCGAGG GCGAACCTCG ACAAGGCCCA GAACGGGAAC
CGACCCGAGG AGATCGCGCA GGCCCAGGCC AGCGTCGCGG AGCGCGAGGC AACACTCGCC
AATGCCAGGC TCGCCTCCGA TCGCGCCGAG CAATTGCTCC GGAGCGGCGC CGGCACGACC
AAGGCCCACG ACGACGCCCT GGCCGCCCTG CGACAGGCAG ACGCGCAACT CAATTCTGCG
CGCCAGTATC TCGCACTGAT GAGGGCGGGT GCCCGTGCCG AAGACATCGC GGCGGCGCGC
GCCCAGCTCG CGAACAGCGA GGCCGCCCTC GCAGTGGCTC AACGCCAGCT CGCGGACGCC
GAGCTCGTGG CGCCGACTGA TGGAACCGTC CTAAGCCGAG TCCGGGAGAC TGGCGCCATC
GTCAACGCCG GCGAGACGGT TTTCGTCCTG AGCCTGACCA ACCCGGTGTG GGTGCGGAGC
TACGTCTCGC AGGTCGACCT CGGCCGCGTA CGGCCCGGCC AGATGGCCAC GATCCGCATC
GACACGCCCG GCGCGCCGAC GTTCAAGGGC TGGGTCGGCT TCATCTCCAC GACCGCGGAG
TTCACCCCGA AGACGGTGGA GACGCGGGAG CTGCGCACGG CGCTCGTCTA CCGCATCCGG
GTTGTGGCGG AGGACCCGCG GGGCGTCCTG CGCCAGGGCA TGCCCGTGAC GATCACCCTG
GCGTCGACAT CGACTGAGCC GATGGTGGCG GGAGCCTCGG AATGA
 
Protein sequence
MTFGLAGAAF WFWSPQVGEL AGRYSWWSTL RSVPALSWLP GPRAAAEGLV LQGNVEVRQV 
NLGFKVGGRI ASLAVDEGAT VREGQSLASL EKVYFEDAVA QARAQRDQAR ANLDKAQNGN
RPEEIAQAQA SVAEREATLA NARLASDRAE QLLRSGAGTT KAHDDALAAL RQADAQLNSA
RQYLALMRAG ARAEDIAAAR AQLANSEAAL AVAQRQLADA ELVAPTDGTV LSRVRETGAI
VNAGETVFVL SLTNPVWVRS YVSQVDLGRV RPGQMATIRI DTPGAPTFKG WVGFISTTAE
FTPKTVETRE LRTALVYRIR VVAEDPRGVL RQGMPVTITL ASTSTEPMVA GASE