| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_7861 |
|---|
| Symbol | |
|---|
| ID | 7295501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011887 |
|---|
| Strand | - |
|---|
| Start bp | 95156 |
|---|
| End bp | 95977 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643592423 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_002490055 |
|---|
| Protein GI | 220914747 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCTGGC AGACGATCGC CGCGCCACTT AGTGTACCTT CCCCAAGGCC GATGACGGTC
CGTGCCCAGT CCATCCCAGC GCGACACTAC TTCTCGAAGC ATGTTCACCG TTGGAATCAA
GTCGTCTACG CGATCGTCGG CGCGCTGACG GTCGCCACGG AGGGGCGCTC CTTCGTGATA
TCACCAGAGC AGGCTGTCTG GCTGCCGACT GGCCTGCCGC ACCGCGTCGG GTCGCTACTC
GGTGCGGAGT TCCGCAATCT GTGGATCGCC GATGAGACCG GCGTGGGCCT TCCGAAGAGC
CCGACCGTCT TCAACGTCTT GCCACTGCTA CAAGCCCTGA TTATTGAGGC TGCGGAGATC
GATGGACAGG AAGACCAAGA TGGCTACGCG GGCCGCATTG CCGGTCTAAT CCTCGATCAA
CTTCAGCGCG CGCGGCCTCT TCCTGCCGCC CTGTCCTGGC CTCGCAGAGG ACCCTTGGCA
AGAATATGCG AGGCCGTATA CGCCGACCCT CGCGATCCAC GCGGGCCCGA GGAACGGGGA
AAAGAACTCG GCATGTCGGG GCGAACCCTG GCCCGCCACT TCCAAGCGGA ACTGGGTATC
AGTTTGCGCT CTTGGCGGCG TCTCCTACGA CTTTTCAAAG CGATCGAATT GCTGGGTGGC
GGCTTAGACG TGACACGCAC GGCAATTGAA CTCGATTACG ACTCAACATC AGCATTTATC
TACGCGTTCC GTGCCGAAAT GGGATGTAGC CCACAAGCCT ACGTGCGCGG ACATGCGGCG
CATCGCCGTT TTCCAACCTG CTGCGGAAAC GCACCAGCGT AG
|
|---|
| Protein sequence | MIWQTIAAPL SVPSPRPMTV RAQSIPARHY FSKHVHRWNQ VVYAIVGALT VATEGRSFVI
SPEQAVWLPT GLPHRVGSLL GAEFRNLWIA DETGVGLPKS PTVFNVLPLL QALIIEAAEI
DGQEDQDGYA GRIAGLILDQ LQRARPLPAA LSWPRRGPLA RICEAVYADP RDPRGPEERG
KELGMSGRTL ARHFQAELGI SLRSWRRLLR LFKAIELLGG GLDVTRTAIE LDYDSTSAFI
YAFRAEMGCS PQAYVRGHAA HRRFPTCCGN APA
|
|---|
| |