Gene Mnod_7858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_7858 
Symbol 
ID7295498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011887 
Strand
Start bp90940 
End bp92124 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content61% 
IMG OID643592420 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_002490052 
Protein GI220914744 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCAGA CCACCACCGC CAAGATTTCG GAAGCTGCCG GCGACCCGGT ACCATCAATC 
GCCGGCATTC CGGCAGCCCC GATCACGCGC GCCCCACCGC TGGCGGCCGG CGCAGGACCA
CTGGGCTGGG CGCGGACGAA CCTGTTCAGC TCGATCCCGT CCACGATCGT GACATTGGTG
CTGCTCATTC TGCTGGCACG ATGGGCAACC GAATTCGTGA ATTGGGCCAT CCTGCATGCC
GTCTGGTCCG TACCGAACAC CGCGACCGGT CCCGACACTG CCGCCTGCCG CGATGCGAAA
GGGATTGGCG CGTGCTGGGC TGTCATTAGC GAGAAGTATC GGTTTATCCT GTTCGGCCGC
TACTTGTACG AGGAGCAGTG GCGGCCGGCA ATCGTCATCG TACTTTTTAT CGGCCTGTAT
GTTGTATCGG CCATGCGCCA GTTCTGGCGC AAGGAGTTGA TTTTAATTTG GATCACCACG
CTTACGGTCG TCGGAGTGCT GATGTGGGGT GGAGTCTTCG GACTGACTTA CGTACCACAA
GATAGTTGGG GCGGACTTCC GATCACGCTG ATCCTAGCCA CATTCGGTCT TGCCTGTGCC
TTTCCGCTTT CGATCCTGGT CGCACTGGGC CGTCGAGCAA CTAATCTGCC GGCGATCCGG
GTTCTCTGCA CGGTTTATGT TGAGCTGATC CGCGGCGTGC CGCTGATCAC AGTTCTCTTT
ATGGCCAGCG TGATGTTCCC GCTGTTCATG CCGGCAGGAC TCAATCCGGA CAAGCTACTG
CGGGCGCAGG TAGCGGTGAT CCTGTTCGCC GCGGCCTATC TCGCGGAAGT GGTCCGGGGC
GGGCTGCAGA CCTTGCCGAA GGGACAGTAC GAGGCGGCCG ACGCGCTTGG ACTTGGTTAC
TGGCACAAGA CAGCCTTCAT CATCTTGCCG CAGGCCCTGC GGCTCGTGAT ACCGCCTTTG
GTCAACACCT TCATCGGCTT CTTCAAAGAC ACTTCGCTCG TGCTCATCAT CGGCCTGTTC
GACCTGCTGA CCGCAGGCAA GGTGGCGATG GCCGACCTCG TCTGGCAGCC CTACAGCACA
GAGGTCTATC TCGTGCTCGC GGCCATCTAC TTCGCTTTCT GCTACGTCAT GGCCCGCTAC
AGCCGCGGGC TGGAGCAGGG ATTCAGCCGT AGCACTAAGC GGTAA
 
Protein sequence
MSQTTTAKIS EAAGDPVPSI AGIPAAPITR APPLAAGAGP LGWARTNLFS SIPSTIVTLV 
LLILLARWAT EFVNWAILHA VWSVPNTATG PDTAACRDAK GIGACWAVIS EKYRFILFGR
YLYEEQWRPA IVIVLFIGLY VVSAMRQFWR KELILIWITT LTVVGVLMWG GVFGLTYVPQ
DSWGGLPITL ILATFGLACA FPLSILVALG RRATNLPAIR VLCTVYVELI RGVPLITVLF
MASVMFPLFM PAGLNPDKLL RAQVAVILFA AAYLAEVVRG GLQTLPKGQY EAADALGLGY
WHKTAFIILP QALRLVIPPL VNTFIGFFKD TSLVLIIGLF DLLTAGKVAM ADLVWQPYST
EVYLVLAAIY FAFCYVMARY SRGLEQGFSR STKR