| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Achl_2366 |
|---|
| Symbol | |
|---|
| ID | 7293839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter chlorophenolicus A6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011886 |
|---|
| Strand | + |
|---|
| Start bp | 2654929 |
|---|
| End bp | 2658939 |
|---|
| Gene Length | 4011 bp |
|---|
| Protein Length | 1336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643590773 |
|---|
| Product | ATP-dependent helicase HrpA |
|---|
| Protein accession | YP_002488420 |
|---|
| Protein GI | 220913111 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1643] HrpA-like helicases |
|---|
| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.00000112008 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTTC ACATTTCCTA TCCCGCCGAG CTGCCGGTCT CCGAGCGCCG CGAGGACCTG
ATGGCAGCCA TCGCGGCCAA CCAGGTGACC ATCATTGCCG GCGAGACCGG TTCCGGAAAA
ACCACCCAGA TCCCCAAGAT GTGCCTGGAG CTGGGATTGG GCGAAAACGG GCTCATCGGC
CACACCCAGC CGCGCCGGCT CGCAGCCCGC ACGGTGGCCG AACGCATCGC CGAGGAACTG
GGCGTGGAAA TCGGCCAGGA GGTGGGCTTC CAGGTCCGCT TCACCGGTGA AGTCAGCAAG
GCCACCAAGG TCAAGCTGAT GACCGACGGC ATCCTGCTGG CCGAGATCCA GCGCGACAAG
CTGCTGCGCA AATACAACGC CATCATCATC GATGAGGCCC ATGAGCGCAG CCTCAACATC
GACTTCATCC TCGGCTACCT GAAGCGGATC CTCCCCCAGC GGCCGGACCT GAAACTCATC
ATCACCTCAG CCACCATCGA TCCCGAGCGC TTCGCCAACC ACTTCGCCGC GCCGGAAACG
CCGGCCCCCA TCATCGAGGT CTCCGGCCGC ACCTTCCCGG TGGAAATCCG CTACCGCCCC
CTCTCGCAGC CCAGGGCGGA AGACGATGAT GCCTCGGACG ACGAACTTGA AGAAGACCGC
GACCCCCTGG ACGCTGTCTG CGACGCCGTG GACGAACTCG CGGCTGAAGC CCCGGGCGAC
ATCCTCGTGT TCTTCTCCGG CGAGCGCGAG ATCCGTGACG CCGCCGAAGC ACTCCAGGCG
CGCATCCAGG GGAACCGCCG GCTCGCCGGT ACCGAAGTGC TTCCGCTCTT CGCCCGCCTG
AGCCTGCAGG AACAGCACAA GGTATTCCAC CCGGGCAGCA AGCGCCGGAT CGTGCTGGCC
ACCAACGTGG CCGAAACCTC GCTGACGGTC CCCGGCATCA AGTACGTGAT CGATACCGGA
ACCGCCCGCA TCTCCCGGTA CTCGCACCGC ACCAAAGTCC AGCGGCTGCC CATCGAACGG
GTTTCCCAGG CCTCCGCCAA CCAGCGGTCC GGGCGCTGCG GCCGCGTCTC CGACGGCATT
GCCATCCGGC TGTACTCGGA GGAGGACTTC GAGTCCCGCC CCCAGTTCAC CGAACCGGAA
ATCCTGCGGA CCAACCTTGC AGCCGTCATC CTGCAGATGA CTGCCATGGG CGTGGCACGC
GGCCCCAAGG ACGTTGAGGA ATTCCCCTTC GTCGAGCCGC CCGAGACCCG CGCCATCAAT
GACGGCGTCA CCCTCCTGCG CGAACTCGGA GCCCTGGCTC CCCCGCGGTC CCAGGGCAAG
GGTGGCCAGG CGGAAACCGG CAACCGTGGC GGCTCGCAGG GCGGCTCGCA GGGCGGTGGC
CTGACCGCCG TCGGGCAAAA GCTCGCCCAA CTGCCGGTGG ATCCCCGCCT GGGGCGCATG
ATCGTTGAAG CCGGCAAGCG CAACTGCGTG CGGGAAGTCA TGATCCTTGC AGCGGCGCTC
ACCATCCAGG ACCCGCGCGA GCGCCCAACG GACAAGCAGC AGCTGGCGGC GGAGAAGCAC
AACCGGTTCA AGGACGAAAA CTCGGACTTC ACCGGCTACC TGAACCTGTG GAACTACCTG
CAGGAGAAGC AGCAGGAACT CTCGTCGTCG GCGTTCCGCC GCCTCTGCCG GGCCGAGTTC
ATCAATTACC TGAGGGTCCG GGAATGGCAG GACCTCTTCA CCCAGCTGCG GCAGTTGGCC
CGCCCGCTGG GCATCACCCT GGACAACAAG CGGCTCACGG ATCCTGTGGG AAACCACGAC
GGCGTCCACA TCAGCCTGCT GTCCGGGCTC CTGAGCCACA TCGGCATCCT GGACGAACGT
AAGCGCGAGT ACGCCGGCGC CCGCGGCAGC AGGTTTGCCA TCTTCCCGGG TTCGGCGCTG
TTCAAGAAGT CCCCCACGTT CGTCATGGCC GCCGAACTGG TGGAAACCAG CAGGCTGTGG
GCCCGGGTGG CCGCGAAGTT CGATCCCGTC TGGGCGGAGC AGGTGGCCCC GGACCTGGTG
AAGCGCAGCT ACAGCGAGCC GCACTGGTCA ACGCGCCAGG GGGCTGTGAT GGCCTATGAA
AAGGTGACCC TGTACGGCGT GCCCATCATC GCCCAGCGGC GGATCAACTA CGGCCGGGTG
GATCCGGTGG TGGCGAGGGA ACTGTTCATC AGGCATGCCC TGGTGGAGGG CGACTGGCGT
ACCCACCACA AGTTCTTCCA CCGCAACCGC GCCCTGCTGC ACGAGGTGGA AGAGCTGGAA
GCCAGGATGC GGCGCCGCGA CCTGATGGTC GACGACGACA CGCTCTTTGA CTTCTATGAC
GCCCGGGTTG GCGCCGACGT GGTCTCGGAG CGCCACTTCG ACAAGTGGTG GAAGGACGCC
CGCAGGGACC ATCCAGACCT CCTCGACTTC GACAAATCAT TGCTGCTCAG CGACGATGCC
GAGGACCTGG ACGAGGCCGC GTACCCGAAA ACCTGGCTGC ACAAGGGCTT CGAGCTTCCG
CTGAGCTACG AGTTCCATCC GGTGGCCCCC GGGTCTCCCC CCAACCCTTC GGACGGTGTC
ACGGCGGAAG TTCCCGTGCT GTTCCTCAAC CAGCTGGAGG ACGCCCCGTT CCGGTGGCTG
ATTCCGGGCC AGCGGGTGGA GCTGGTGACT GCCCTGATCA AGTCGTTGCC CAAACAGGTG
CGGAAGAACT TTGTCCCGGC TCCTGATGTG GCACGCCAGG CCGTGGCCCT GCTTGAAGCC
GACTTCGACC CGGCCGCGGA TGCGCTGGAG CCCTCGCTGG AACTCGCCCT CCGCCGCCTC
CGCGGAGTGG TCATACCGCC CGGTTCGTGG AACTGGGACG CCGTGCCGCC GCACCTGCGC
GTGAGCTTCA CGGTGGTGGA CGGCAAGGGC AAGGCCCTCG GTGAAGGAAA GGACCTTGCG
GCGCTCCAGG AGAGCCTCGC TCCGGCTACC CGCCGGGCCA TTGCGGAGTC CCTCGGAGCC
ACGCCCGCCA CAACGGCCCG CGCCAAGGGC CAAGGGGCGC CCGGGGCCGC TCCAGCAGGA
GTAACGCCCG ACGGCGGAGC GGGGCCGGCC GGGCAGCCCG CCCCCGCCAA CGCCGGAGGC
AGCCCCGCGG CTGCCGGATT CGTGGAGCGC GACGGCTTGA CGGAGTGGAG CTTCGGCACC
GTCGAACGCC AGGTCAGCAA CATGGTGAAG GGCCATACGG TGACCGGATA CCCGGCGCTG
GTGGACCAGG GAGCATCCGT GTCACTGCAG GTCTTCCAGA CCCCGGACGA GCAGCTGGAC
GCCATGCGGG GCGGCGTAAT CCGCCTGCTG GCGCTGCGTG TGCCGGCGCC GGACCGCTAC
GTCCTCGAAC ACCTGAGCAA CACCGAAAAG CTCACCTTCA GCCAAAATCC GCACGGCTCA
GTGTCAGCCC TCATTGCCGA CTGTGCACTG GCGGCCATCG ATAAGCTCAC CCCGGCAGAG
CTGCCGTGGG ACAGGAACGC CTTCGACCGG CTCTATGAGG TGGTCCGTGC GGAGCTGATC
GACACCGTGT TCAGCGTGAC TGCCGTCGTG GAGCGCATCC TCGCCAGCAC CCGCCGGATC
GAAAAGCAGC TTAAGGGAAC CACCAGCCTG GCCCTGATCA GCGCCCTGAA CGATATCAAG
AGCCAGTTGG AGCAGCTGGT CTACCCGGGT TTTGTGGCAC GCACGGGCTA CGCACAGCTC
AGCCAGTTGC CCCGGTACCT CACGGCCATT GAAAAGCGGC TGGAACGCCT TCCGGGCAAC
GTCCAGCGCG ACGCCCTCAA CATGGCAGTG GTCCAACGCC TCGAAGACGA CTACGACGAT
GCCGTCCCGG CGTTGCTCCC CGGGCGGCGC GCCGGGCGCG ATTTAACCCA GGTGCGCTGG
ATGCTCGAGG AGCTCCGGGT GAGCCTCTTC GCCGTCGAAC TTGGAACTGC CTACTCCGTC
TCGGAGAAGC GCATCCGTGC CGTACTCAAC AAGGCCCTGG CCCCCGCCTA G
|
|---|
| Protein sequence | MTFHISYPAE LPVSERREDL MAAIAANQVT IIAGETGSGK TTQIPKMCLE LGLGENGLIG
HTQPRRLAAR TVAERIAEEL GVEIGQEVGF QVRFTGEVSK ATKVKLMTDG ILLAEIQRDK
LLRKYNAIII DEAHERSLNI DFILGYLKRI LPQRPDLKLI ITSATIDPER FANHFAAPET
PAPIIEVSGR TFPVEIRYRP LSQPRAEDDD ASDDELEEDR DPLDAVCDAV DELAAEAPGD
ILVFFSGERE IRDAAEALQA RIQGNRRLAG TEVLPLFARL SLQEQHKVFH PGSKRRIVLA
TNVAETSLTV PGIKYVIDTG TARISRYSHR TKVQRLPIER VSQASANQRS GRCGRVSDGI
AIRLYSEEDF ESRPQFTEPE ILRTNLAAVI LQMTAMGVAR GPKDVEEFPF VEPPETRAIN
DGVTLLRELG ALAPPRSQGK GGQAETGNRG GSQGGSQGGG LTAVGQKLAQ LPVDPRLGRM
IVEAGKRNCV REVMILAAAL TIQDPRERPT DKQQLAAEKH NRFKDENSDF TGYLNLWNYL
QEKQQELSSS AFRRLCRAEF INYLRVREWQ DLFTQLRQLA RPLGITLDNK RLTDPVGNHD
GVHISLLSGL LSHIGILDER KREYAGARGS RFAIFPGSAL FKKSPTFVMA AELVETSRLW
ARVAAKFDPV WAEQVAPDLV KRSYSEPHWS TRQGAVMAYE KVTLYGVPII AQRRINYGRV
DPVVARELFI RHALVEGDWR THHKFFHRNR ALLHEVEELE ARMRRRDLMV DDDTLFDFYD
ARVGADVVSE RHFDKWWKDA RRDHPDLLDF DKSLLLSDDA EDLDEAAYPK TWLHKGFELP
LSYEFHPVAP GSPPNPSDGV TAEVPVLFLN QLEDAPFRWL IPGQRVELVT ALIKSLPKQV
RKNFVPAPDV ARQAVALLEA DFDPAADALE PSLELALRRL RGVVIPPGSW NWDAVPPHLR
VSFTVVDGKG KALGEGKDLA ALQESLAPAT RRAIAESLGA TPATTARAKG QGAPGAAPAG
VTPDGGAGPA GQPAPANAGG SPAAAGFVER DGLTEWSFGT VERQVSNMVK GHTVTGYPAL
VDQGASVSLQ VFQTPDEQLD AMRGGVIRLL ALRVPAPDRY VLEHLSNTEK LTFSQNPHGS
VSALIADCAL AAIDKLTPAE LPWDRNAFDR LYEVVRAELI DTVFSVTAVV ERILASTRRI
EKQLKGTTSL ALISALNDIK SQLEQLVYPG FVARTGYAQL SQLPRYLTAI EKRLERLPGN
VQRDALNMAV VQRLEDDYDD AVPALLPGRR AGRDLTQVRW MLEELRVSLF AVELGTAYSV
SEKRIRAVLN KALAPA
|
|---|
| |