Gene Cyan7425_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_0060 
Symbol 
ID7291350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011885 
Strand
Start bp55970 
End bp56728 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content52% 
IMG OID643588275 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_002485971 
Protein GI220910661 
COG category[M] Cell wall/membrane/envelope biogenesis
[G] Carbohydrate transport and metabolism 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCAT CGAAAATTTT GGTCACAGGC GGAACAGGTT TTCTCGGTTC ACAGGTGGTC 
GATCGCTTGC AATCTGCTAA TTGCAACGTC CAGGCTCTCA GCCACAGTGA CCGCCCCGGC
ACCGTTCAAG CAGACTTGCT GACGGGTGAG GGATTGAAGC AAGCCGTAGC AGGAATTGAT
ACCATTATTC ATTGTGCTTC CAGTCCCACC AATCCCCGTC AGGTCGATGT TGAAGGGACA
AAACGTCTAC TTCAAGCCGC AGAACAGGTA GGGGTCTCTC ACATTGTTTA TATCTCGATC
GTCGGAGTCG ATCGCAATCC CTTCTATCCC TACTACGGTA TGAAACTGGA GACTGAACAT
ATCATCGAAC AGTCTTCCAT CGGGTGGACA ATTCTCAGAG CAACGCAGTT TCATGAGTTT
GTTCTGATGC TGATTCAATC GCTCGATCGT CTCCCTGTCA TGCTCATGCC CAAAGGCTTT
CTGCTGCAGC CGATTCAAGC GAGTGAAGTT GCCGATCGCC TGGTAGAACT GGCTCTTGGA
GCCCCTGCCG GACGAGTGGC CGATATCGGT GGTCCCGAAG TTTGGACAGC CGCCGATCTG
GCCAGAGCGT ATTTCAAATC AACTGGGCGC AAACGAAGTG TTGTCGAACT TCCGATTCCT
GGCAAAATCG CGCAAGCATT TCGTACCGGA GCGCAACTCT GCCCTGAGCA GAGGTATGGC
AACGTTGGCT GGGATGAGTT CTTGAATCAG ACCCTCTAA
 
Protein sequence
MNSSKILVTG GTGFLGSQVV DRLQSANCNV QALSHSDRPG TVQADLLTGE GLKQAVAGID 
TIIHCASSPT NPRQVDVEGT KRLLQAAEQV GVSHIVYISI VGVDRNPFYP YYGMKLETEH
IIEQSSIGWT ILRATQFHEF VLMLIQSLDR LPVMLMPKGF LLQPIQASEV ADRLVELALG
APAGRVADIG GPEVWTAADL ARAYFKSTGR KRSVVELPIP GKIAQAFRTG AQLCPEQRYG
NVGWDEFLNQ TL