| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_5242 |
|---|
| Symbol | |
|---|
| ID | 7291197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 5346708 |
|---|
| End bp | 5348168 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643588199 |
|---|
| Product | Orn/Lys/Arg decarboxylase major region |
|---|
| Protein accession | YP_002485895 |
|---|
| Protein GI | 220910584 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGATC AAACCCAAGT TCCAATTCTG GCAGCCTTAG AGTCGAGGGG ATTCCGGGAG
CACGCCCCCT TCTACACACC GGGTCACAAG CGGGGCAGGG GAACACCAGC TCCTTTACTG
CAGGCTTTGA AGGCAGATTG CTTAAAACTG GATTTGCCGG AACTACCGGG GTTAGATAAC
CTGTTTATGC CAGAGGGGAT TATTCAAGAG GCTCAGACCC TGGCAGCGGC AACCTTTGGC
GCAGAACAAA CCTGGTTTTT GGTCAATGGC TCCACCTGCG GAATTATCGC AGCCCTCATG
GCGGTTTGCC AGCCGGGAGA TTATATTATT CTTCCCCGTA ATGTTCATCA ATCGGCGATC
GCTGGACTGA TCCTCACCGG AGCGATTCCT GTCTTTGTTG ACCCTGCTTA CAATGCTGAG
CTGGATTTAG TGGGTAGTCC CACTCCAGAA AGTGTTGCCC TAGCTCTAAC TCAGTATCCC
CAGGCTAAAG CTGTGTTGGT TACCTCTCCC ACCTATGAGG GGGTTTGTGC CAAGCTGGAA
ACGATCGCCC CCCTGGTACA TCAGCATGGC ATTCCGTTAC TGGTGGATGA AGCCCATGGC
CCCCACTTTC ACTTTCATCC AGATTTACCT GTAGATGCCC TCACCGCCGG AGCGGATTTA
ACGGTGCAGT CCACCCATAA AGTTCTGGCC GCTCTGACTC AAGCTTCCAT GCTGCACGTG
CAGGGAACTC GGATCGATCG CCAGCGGCTG CAACAAGCTT TATCCCTGGT GCAATCCTCC
AGTCCTAATT ACCTCCTCCT CGCCGCTCTG GATGCCGCCC GCCAACAAAT GGCCTTACAG
GGAGAGGTCA TTCTAACGGA AACCCTTCAC TTAGCTACTC AAGCACGGGA ACAAATTAAG
GCCATTCCTC TTTTGCAGGT CTTGGGAACG GAACACTTGC AAGAGGATGG TTTTGCTGCG
ATCGATCCCA CCCGGTTAAG GATTAGTGTT GCCCCCCTGG GACGGAGTGG GTTTGAGGTG
GATGAGCAAC TGGATCAACA TGGCGTTACC GCTGAATTTC CCTCCCTTTC GGCCCTGACA
TTTATTATCA GCTTGGGCAA TACAGCAGCG GATATCGATC GCCTCGTCAA TGGATTGAGC
CAGATTGCTG AGGATAGCCT GCCTAGATCG AACGATCGCC CAATGATGGC CTTCCCTTTC
CCCGAACTCA TAGCCACCCC GTCCCTCTCC CCCCGTGAGG CTTTCTTTGC TAGCCATGAA
ACTGTACCCT TTGATCGAGC CGTCGATCGC ATCAGCGCAG AACTAGTCTG TCCTTACCCA
CCGGGCATTC CCATGCTCTT ACCAGGAGAA GCGATCGCCC CCGCCGCCCT GGATTATCTG
CGTCAGGTCC AAACAGCAGG CGGTATGATC ACAGGCTGTA GCAACCCCAG GCTGGAAACG
TTAAAAGTTG TTCGGAGTTA G
|
|---|
| Protein sequence | MLDQTQVPIL AALESRGFRE HAPFYTPGHK RGRGTPAPLL QALKADCLKL DLPELPGLDN
LFMPEGIIQE AQTLAAATFG AEQTWFLVNG STCGIIAALM AVCQPGDYII LPRNVHQSAI
AGLILTGAIP VFVDPAYNAE LDLVGSPTPE SVALALTQYP QAKAVLVTSP TYEGVCAKLE
TIAPLVHQHG IPLLVDEAHG PHFHFHPDLP VDALTAGADL TVQSTHKVLA ALTQASMLHV
QGTRIDRQRL QQALSLVQSS SPNYLLLAAL DAARQQMALQ GEVILTETLH LATQAREQIK
AIPLLQVLGT EHLQEDGFAA IDPTRLRISV APLGRSGFEV DEQLDQHGVT AEFPSLSALT
FIISLGNTAA DIDRLVNGLS QIAEDSLPRS NDRPMMAFPF PELIATPSLS PREAFFASHE
TVPFDRAVDR ISAELVCPYP PGIPMLLPGE AIAPAALDYL RQVQTAGGMI TGCSNPRLET
LKVVRS
|
|---|
| |