Gene Cyan7425_5225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_5225 
Symbol 
ID7291180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp5330043 
End bp5330627 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content55% 
IMG OID643588182 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_002485878 
Protein GI220910567 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.109231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAATT CTCCAAGTCA GCGACGTTTG CTTCTCCTGC TTGGCAGCCT GACGGGTTGC 
GGTTTACTGG TTGGACTCCC AGCGATCGCC CAGACGAACA CGAATCCAGT GGAAACCCAG
CCTGCGGTTC CCCCCGCTGC CACAGCAGAG CAATCTGCTA GCAATCTGCT GCAAGCTGCC
TCCCGTCAAG GCCAGTTCAA GACCCTGGCT AAGCTCGTAC AGGCTGCTGA GTTAGACAAT
GCCTTGCAGA CGCAGGGGGG TAAATTCACG ATCTTTGCTC CCACCGATGC CGCCTTTGCC
GAACTTCCGG CTGACACCCT GGAAAAGCTA CAACGCCCTG AAAATCGCGC GATGCTGCGC
CAGATTCTGG GTTACCACGT TGTCCCTCAG GAACTTCCTG CCAATCAGCT CAAAACAGGC
AGCCTCGATT CCCTGGCTGG GGGTCTGGCA GTCCGGGTGG AAGGAACGAG TGTCATTGTC
AACGATGCCA GTGTTACCCA ACCCGACATT AAAGCCTCCA ATGGGGTCAT TCACGGGATT
AACAAAGTTT TGTTACCTGC TAACATGACC ACTTCAGCCA AATAG
 
Protein sequence
MQNSPSQRRL LLLLGSLTGC GLLVGLPAIA QTNTNPVETQ PAVPPAATAE QSASNLLQAA 
SRQGQFKTLA KLVQAAELDN ALQTQGGKFT IFAPTDAAFA ELPADTLEKL QRPENRAMLR
QILGYHVVPQ ELPANQLKTG SLDSLAGGLA VRVEGTSVIV NDASVTQPDI KASNGVIHGI
NKVLLPANMT TSAK