Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_5225 |
Symbol | |
ID | 7291180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | + |
Start bp | 5330043 |
End bp | 5330627 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643588182 |
Product | beta-Ig-H3/fasciclin |
Protein accession | YP_002485878 |
Protein GI | 220910567 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.109231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAATT CTCCAAGTCA GCGACGTTTG CTTCTCCTGC TTGGCAGCCT GACGGGTTGC GGTTTACTGG TTGGACTCCC AGCGATCGCC CAGACGAACA CGAATCCAGT GGAAACCCAG CCTGCGGTTC CCCCCGCTGC CACAGCAGAG CAATCTGCTA GCAATCTGCT GCAAGCTGCC TCCCGTCAAG GCCAGTTCAA GACCCTGGCT AAGCTCGTAC AGGCTGCTGA GTTAGACAAT GCCTTGCAGA CGCAGGGGGG TAAATTCACG ATCTTTGCTC CCACCGATGC CGCCTTTGCC GAACTTCCGG CTGACACCCT GGAAAAGCTA CAACGCCCTG AAAATCGCGC GATGCTGCGC CAGATTCTGG GTTACCACGT TGTCCCTCAG GAACTTCCTG CCAATCAGCT CAAAACAGGC AGCCTCGATT CCCTGGCTGG GGGTCTGGCA GTCCGGGTGG AAGGAACGAG TGTCATTGTC AACGATGCCA GTGTTACCCA ACCCGACATT AAAGCCTCCA ATGGGGTCAT TCACGGGATT AACAAAGTTT TGTTACCTGC TAACATGACC ACTTCAGCCA AATAG
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Protein sequence | MQNSPSQRRL LLLLGSLTGC GLLVGLPAIA QTNTNPVETQ PAVPPAATAE QSASNLLQAA SRQGQFKTLA KLVQAAELDN ALQTQGGKFT IFAPTDAAFA ELPADTLEKL QRPENRAMLR QILGYHVVPQ ELPANQLKTG SLDSLAGGLA VRVEGTSVIV NDASVTQPDI KASNGVIHGI NKVLLPANMT TSAK
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