| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_5155 |
|---|
| Symbol | |
|---|
| ID | 7291109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 5250199 |
|---|
| End bp | 5251422 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643588112 |
|---|
| Product | protein of unknown function DUF214 |
|---|
| Protein accession | YP_002485809 |
|---|
| Protein GI | 220910498 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01185] DevC protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTCTA TTGCCCGCAA GAATTTGTTT GAAGATCTGC CCCGGTTTAT GGTTGCCCAG
GCCGGAATTA TGTTTGCTGT TGGCCTGGTC ACAATTCAAG CCGGTCTCTA TCAGGGATTC
AGCAAATCTT CCAGTCTACT GGTCGATAAC GGCAAGGCTG ACCTCTGGCT CGCTTCCAAA
GACCTGAGTT ATTTTGATCT GACCCTGCCG ATCGATTATG AATTACTCGA CCAGTCCAGA
AAGGTGGCTG GGGTGGAGCG GGCTGAAGCA CTGATCACGA GGGGAGCCCT CTGGCAACCG
TTGCGTCCGG CGGGAACACC TGCGAATCAG CCCAATAAAC TGACCAGTGT GCGGTTGATT
GGCGTTGATC CCAAGGGTGA ATTGTTTACT CCTTGGAAAA TAATTCAGGG GAGAGCGCAG
GATTTAGAGC AGCCCTATAG TGTCATGGTC GATCAAAGCG ATCTGGTCAG TCTGTCTGGT
AATCCTCAAA CTCCACTAGG GGTGGGGGAC AGAGCTGAGC TGAATAATTC CTATACCGTC
ACTGTGAAGG GGATCACCCA GGGGATTCGG TCTATCTTTT CTGGTCCGTT TGCTTTTACT
TCCCTGGAAA ATGCCAACCT CTACACCACG CCCAAAAGTG CCTTTCCCCA GGGGGTTGCC
CCCTCTACTC CCCCTGCCCT GCGTCCTCAA GATCAGATCA GTTTTATTTT GATTCGGGCT
AAGCCGGGGA TGGATGTACA GGATTTGCAG CGATCGCTGC AAGCCGAGCT GCCGGAGCTG
CGGGCCTTCA CCCAGGCGGA ACTCTCGCAG TTGACCCAGA ATTACTGGCA GCGCAGTACA
GGGGTTGGCT TCATTCTGGG CATGGGGGCA ACTGTGGGCA TGGTGGTGGG CATGGTAGTG
GTCAGCCAGA TCCTGTATTC TTCTGTCTCC GATCACCTCA AGGAATTTGC TACCCTCAAA
GCCATGGGAG CTTCGGACTG GTCGATCTAC CGCATCATTA TTGAGCAGGC GCTGTGGATG
GCGATCCTGG GTTATCTGCC GGGGATGGGG ATCTGTATTG TGTTGGGCTC TTGGACACTG
CAAGCTCGGG CGATCCAAAT TTTGATCACT CCCGCCTCTG CCAGTCTGGT CTTGGGGGTT
ACGACGGTGA TGTGTGTTGG GGCAGCCCTG ATTGCCATTC GCAAAGTCAC CCACCTCGAT
CCAGCCATGG TATTCAAATC CTGA
|
|---|
| Protein sequence | MVSIARKNLF EDLPRFMVAQ AGIMFAVGLV TIQAGLYQGF SKSSSLLVDN GKADLWLASK
DLSYFDLTLP IDYELLDQSR KVAGVERAEA LITRGALWQP LRPAGTPANQ PNKLTSVRLI
GVDPKGELFT PWKIIQGRAQ DLEQPYSVMV DQSDLVSLSG NPQTPLGVGD RAELNNSYTV
TVKGITQGIR SIFSGPFAFT SLENANLYTT PKSAFPQGVA PSTPPALRPQ DQISFILIRA
KPGMDVQDLQ RSLQAELPEL RAFTQAELSQ LTQNYWQRST GVGFILGMGA TVGMVVGMVV
VSQILYSSVS DHLKEFATLK AMGASDWSIY RIIIEQALWM AILGYLPGMG ICIVLGSWTL
QARAIQILIT PASASLVLGV TTVMCVGAAL IAIRKVTHLD PAMVFKS
|
|---|
| |