| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_5031 |
|---|
| Symbol | |
|---|
| ID | 7290984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 5118670 |
|---|
| End bp | 5119728 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643587991 |
|---|
| Product | photosystem II D2 protein (photosystem q(a) protein) |
|---|
| Protein accession | YP_002485689 |
|---|
| Protein GI | 220910378 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01152] Photosystem II, DII subunit (also called Q(A)) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATAG CAGTCGGACG CATGCAGCCT ACGCGAGGAT GGTTTGACAT TCTCGACGAC
TGGCTGAAGC GGGATCGCTT TGTATTTGTC GGCTGGTCAG GGATTTTATT ATTTCCCTGC
GCCTACCTCG CTCTCGGGGG CTGGCTCACT GGCACCACCT TCGTCACCTC CTGGTATACC
CACGGGCTGG CCTCCTCCTA TCTGGAAGGG TGCAACTTCC TCACTGTCGC TGTCTCCACT
CCCGCTAACA GCATGGGTCA CTCTCTGCTG CTGCTGTGGG GTCCAGAAGC TCAGGGAGAC
TTCACCCGCT GGTGCCAGTT GGGTGGCTTG TGGACTTTTG TCGCCCTCCA CGGGGCTTTT
GGGCTGATTG GCTTTATGCT GCGGCAGTTT GAAATTGCCC GGCTCGTGGG CTTACGTCCC
TACAATGCCA TTGCCTTCAG TGCCCCCATC GCAGTGTTTG TCTCTGTGTT TCTGATGTAC
CCCCTGGGAC AATCCGGGTG GTTTTTTGCC CCCAGTTTCG GGGTGGCGGG GATCTTCCGC
TTTATTCTGT TTGTCCAGGG CTTCCATAAT TTCACCCTCA ATCCCTTCCA CATGATGGGG
GTCGCAGGGG TGCTCGGTGG CGCTTTACTC TGTGCCATTC ACGGCGCTAC GGTGGAAAAC
ACCCTGTTTG AAGATGGCGA AACTTCCAAC ACCTTCCGCG CCTTCAATCC GACCCAGGCG
GAGGAAACCT ATTCCATGGT CACCGCCAAC CGCTTCTGGA GTCAGATTTT TGGCATTGCC
TTTTCCAACA AACGCTGGTT GCACTTCTTC ATGCTGTTTG TGCCGGTGAC GGGCTTGTGG
ATGGCTTCCG TCGGGATTGT TGGCATTGCC CTCAACCTGC GGGCCTATGA CTTCATTTCC
CAGGAAATTC GGGCCGCGGA AGACCCTGAG TTTGAAACGT TCTACACCAA GAACATTCTG
CTCAATGAAG GGATTCGCGC CTGGATGGCC ACCCAGGACC AGCCCCATGA AAACTTTATC
TTCCCCGAAG AGGTACTTCC CCGTGGTAAC GCTCTCTAG
|
|---|
| Protein sequence | MTIAVGRMQP TRGWFDILDD WLKRDRFVFV GWSGILLFPC AYLALGGWLT GTTFVTSWYT
HGLASSYLEG CNFLTVAVST PANSMGHSLL LLWGPEAQGD FTRWCQLGGL WTFVALHGAF
GLIGFMLRQF EIARLVGLRP YNAIAFSAPI AVFVSVFLMY PLGQSGWFFA PSFGVAGIFR
FILFVQGFHN FTLNPFHMMG VAGVLGGALL CAIHGATVEN TLFEDGETSN TFRAFNPTQA
EETYSMVTAN RFWSQIFGIA FSNKRWLHFF MLFVPVTGLW MASVGIVGIA LNLRAYDFIS
QEIRAAEDPE FETFYTKNIL LNEGIRAWMA TQDQPHENFI FPEEVLPRGN AL
|
|---|
| |