Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_4968 |
Symbol | hemC |
ID | 7290921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | - |
Start bp | 5052232 |
End bp | 5053200 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643587929 |
Product | porphobilinogen deaminase |
Protein accession | YP_002485627 |
Protein GI | 220910316 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGTTT CAGTTTCCGG CTCCTCTCGC ACCATTCGGA TCGGTTCGCG TAAAAGTCAG CTTGCCCTGG TACAAACCTA CTGGGTGCAG GAGCAATTAC AAAAACACTT TCCCGATCGT AGCTTTGAAG TGCATACGAT GAGCACCCAG GGAGACAAAA TTCTGGATGT GGCGCTGGCT AAGATTGGCG ATAAGGGCTT ATTTACCAAA GAACTAGAGC AGGGAATGCT CAGTCAGGAA ACGGACTTTG CGGTTCATTC CCTCAAGGAT CTACCAACCC ACTTGCCGGA TGGACTAATC CTGGGCTGTA TTACCGAGCG GGAAAATCCA GCGGATGCCC TGGTTATGAA TGAAAAGTAC CGGGATCGCC CACTGGAAAC TCTGCCGGAA GGGGCGGTGA TTGGTACTTC TTCCCTGCGC CGACTGGCTC AACTGCGCCA CTATTTCCCC CACCTCACCT TCAAAGATGT GCGGGGCAAT GTGAATACGC GGCTGGCGAA ACTGGATGCC GGGGAGTACG ATGCCCTGGT GCTGGCGGTG GCGGGTTTGC AGCGTCTGGG CTTTAGCGAT CGCATCCACC AGATCTTACC CCCAGAAATT TCTCTCCATG CCGTTGGACA GGGGGCTTTG GGGATTGAAT GCCGGAGCGA CGATCCAGAA GTTTTGAGTT TGATTAAGGC TTTAGAACAT CAACCCACGG CCTGGCGTTG TCTGGCTGAG CGGGCCTTTC TGCGAGAACT GGAGGGTGGC TGTCAGGTCC CGATCGGAGT GAATACCCAG CTGGAAGGCG ATCAACTCAC TTTAACCGGC CTGGTGGCCA GTCTGGATGG TCAGCGGCTG ATTAAGGATC AGATCACGGG AGCAGCGACC ACAGCAGAAC AGATGGGCAC AGAACTGGCT CAGCGTCTCC GGCAGCAGGG AGCAGAGGAA ATTTTGGCGG CTATTTTTGC TGAAGTTCGT TCTAGCTGA
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Protein sequence | MTVSVSGSSR TIRIGSRKSQ LALVQTYWVQ EQLQKHFPDR SFEVHTMSTQ GDKILDVALA KIGDKGLFTK ELEQGMLSQE TDFAVHSLKD LPTHLPDGLI LGCITERENP ADALVMNEKY RDRPLETLPE GAVIGTSSLR RLAQLRHYFP HLTFKDVRGN VNTRLAKLDA GEYDALVLAV AGLQRLGFSD RIHQILPPEI SLHAVGQGAL GIECRSDDPE VLSLIKALEH QPTAWRCLAE RAFLRELEGG CQVPIGVNTQ LEGDQLTLTG LVASLDGQRL IKDQITGAAT TAEQMGTELA QRLRQQGAEE ILAAIFAEVR SS
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