| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_4852 |
|---|
| Symbol | |
|---|
| ID | 7290806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 4934167 |
|---|
| End bp | 4936923 |
|---|
| Gene Length | 2757 bp |
|---|
| Protein Length | 918 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643587818 |
|---|
| Product | cyanophycin synthetase |
|---|
| Protein accession | YP_002485516 |
|---|
| Protein GI | 220910205 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase
[COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02068] cyanophycin synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.744581 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTC TCAAAATCCA AACCCTCCGC GGCCCTAACT ACTGGAGCAT TCGCCGCCAT
AAGTTGGTGG TCATGCGGCT GGATCTGGAG GATCTAATCG AAAAACCCTC AAATGAAATT
CCTGGTTTTG CCGACAACCT GATTAAAGTC CTCCCCAGCC TCTACCATCA TTTTTGTTCC
TTGGGTCGCG AAGGAGGGTT CCTGACCCGG TTGTACGAAG GAACGCTGAT GGGGCATATC
ATTGAGCACG TTGCCCTGGA ACTGCAGGAT CTGGCCGGGA TGCCCGTGGG GTTTGGGCGC
ACGCGGGAAA CTTCTACCCC CGGTGTGTTT CAGGTCGTGA TTGAATACCT GGATGAGCAA
GCGGGGCGCT ATGCAACACG GGCGGCGGTG AGGCTGTGTC AGAGTGTGGT GGAGACGGGC
ACCTATCCTG AGACCGAGCT GCAACAAGAT CTGCAAGACC TGCGGGATTT CTGGTCTAAG
GCGTCCTTGG GCCCAAGCAC AGAAGCGATC GTCAAGGAAG CGGAAAATCG GGGGATTCCC
TGGTTTGAAA TGAGTAGCCG TTCCCTGATT CAACTGGGTT ATGGAGCCTG TCAGAAACGG
GTTCAAGCCA CCCTCAGCAA CCACACCGGG ATTCTGGCGG TGGAACTGGC CGGCGATAAG
GAAGGGGCCA AAAAGGTGAT GGCGGATGCC GGAATTCCTG TCCCGAAAGG AACTGTGATT
CGCTACTTAG ATGAGCTAGA GGATGCGATC GCCTCGATTG GTGGTTATCC GGTGGTGATC
AAACCCCTGA ATGGCAATCA CGGGCGCGGG ATTACGATCG GGGTCAACTC CTGGGAAATA
GCGGAGCAGG CCTACGACGT TGCCAGTGAG GTGTCCAAAT CCGTCATTGT GGAGCATTAC
CATCCCGGTA AAGATTTTCG TGTTTTGGTG GTGAACGGTA AGGTTGTGGC GGTGGCAGAG
CGGGTGCCGG CCCATGTGGT TGGTGATGGT CAGTCCATGA TCAGCGAACT GATTGAAAAG
ACCAACCAGG ACCCGCAGCG GGGAGAAGGG CACGACAATG TTCTGACCAA AATTGAGATT
AACCACACCA CCTGGCAGTT GCTGGAACAG CAGGGTTATA ACCTGGAAAC GGTGTTACCA
GCGGGCGACA TTTGTTATCT GCGGGCCACG GCTAACTTGA GTACGGGAGG AATTGCCGTC
GATCGCACCG ATGAAATTCA CCCGGAAAAT GTCTGGGTCG CCCAGCGTGT GGCCCGCATT
ATCGGGCTGG ATATTGCTGG AATTGATGTG GTCACCCCCG ATATCACCAA ACCACTGCGG
GAAGTTGGCG GTGTAATTGT CGAAGTGAAT GCTGCTCCTG GCTTCCGGAT GCACACCTCC
CCCAGTCAAG GGATTGCCCG CAATGTGGCT GAACCCGTGA TTTCCATGCT CTTTCCACCG
GGGGTGCCCA GTCGAATTCC AATTCTGGCA GTTACGGGTA CGAATGGTAA AACCACCACC
ACCCGCCTGC TGGCCCATAT TTGTAAACAA ACCGGGCGGA CCGTTGGCTA CACCACCACT
GATGGCATCT ATATCGGCGA CTACATGGTG GAGAAAGGCG ATACCACCGG CCCCCAGAGT
GCCCAGGTCA TTCTCAAAGA CCCCACAGTA GAGATTGCCG TGCTGGAAAC TGCCCGAGGT
GGGATTCTAC GTTCCGGGCT AGGCTTTGAC CAGTGTGATG TTGGCGTGGT GCTGAATGTG
CAGGCCGATC ACCTCGGACT GGGGGATATT GACACGATCG ATCAACTGGC GGATCTAAAA
GCCGTGGTGG TGGAAACTGC CCGAACCGAT GGCTATGCCG TGCTCAATGC CGATGATCCC
ATGGTCGCCC CCATGGCCCA GCACGTCCAG GCCCAGGTCG CCTACTTCTC GCTCAATCCA
GATAATCCCC TGATTCGTCA GCATATCGAT CGAGGCGGTC TGGCGGCGGT CTATGAAAAT
GGCTATCTGT CAATTCTGAA AGGAGATTGG ACCCTGCGGA TTGAACAGGC GGTGAATGTG
CCGATCACAA TGGCAGGTCG GGCCAGCTTT ATGATTGCCA ATGCCCTGGC GGCCAGTCTA
GCGGCCTTTG CCCAAGGGAT TGCGATCGAA CATATTCGGG CCGCACTGAC CAGTTTCCGT
ACCTCTGCCA GTCAAACCCC AGGCCGGATG AACCTGTTTG ATTTGGGCCG CTTCAGTGCC
CTGGTGGATT ATGCCCACAA TCCGGCAGGT TATCAGGCGG TGGGAGACTT TGTCCTCAAA
TGGCCAGGGG AACGCATTGG GGTTGTGGGC GGTCCTGGCG ATCGTCGGGA TGAAGATCTG
GAAACCCTCG GTTCACTTTC AGCTCAAATT TTCGATCGCG TCATTGTCAA AGAAGATGAT
GACACCCGTG GGCGGGCGCG GGGCAATGCG GCGGAGTGGA TCAAGGCTGG CCTGTTGCAG
GTTAAGCCGG ACTACAGCTA TGAAGAAATT CTGGATGAAA CCACCGCCAT TAGTAAAGCC
TTAGAAACAG CCCCCGATGG CAGTTTAGTG GTCATTTTCC CAGAACGGGT CAGCCGGGCC
ATTGAGCTGA TTGAAACTTA CCGGCTCAGC CAGGGGATCA ATGCAGCAGT GACTAACCCC
AATGGCAGCA GCAATGGCAG CACTACCCCC TCTGCGGCTG CGACGACGGA CTCCGGTCTA
CCTGCCCCCA ACGAAACGGT CGAACCCCTC AGTTCCACTC CTGGGAATCC GGGGTAG
|
|---|
| Protein sequence | MKILKIQTLR GPNYWSIRRH KLVVMRLDLE DLIEKPSNEI PGFADNLIKV LPSLYHHFCS
LGREGGFLTR LYEGTLMGHI IEHVALELQD LAGMPVGFGR TRETSTPGVF QVVIEYLDEQ
AGRYATRAAV RLCQSVVETG TYPETELQQD LQDLRDFWSK ASLGPSTEAI VKEAENRGIP
WFEMSSRSLI QLGYGACQKR VQATLSNHTG ILAVELAGDK EGAKKVMADA GIPVPKGTVI
RYLDELEDAI ASIGGYPVVI KPLNGNHGRG ITIGVNSWEI AEQAYDVASE VSKSVIVEHY
HPGKDFRVLV VNGKVVAVAE RVPAHVVGDG QSMISELIEK TNQDPQRGEG HDNVLTKIEI
NHTTWQLLEQ QGYNLETVLP AGDICYLRAT ANLSTGGIAV DRTDEIHPEN VWVAQRVARI
IGLDIAGIDV VTPDITKPLR EVGGVIVEVN AAPGFRMHTS PSQGIARNVA EPVISMLFPP
GVPSRIPILA VTGTNGKTTT TRLLAHICKQ TGRTVGYTTT DGIYIGDYMV EKGDTTGPQS
AQVILKDPTV EIAVLETARG GILRSGLGFD QCDVGVVLNV QADHLGLGDI DTIDQLADLK
AVVVETARTD GYAVLNADDP MVAPMAQHVQ AQVAYFSLNP DNPLIRQHID RGGLAAVYEN
GYLSILKGDW TLRIEQAVNV PITMAGRASF MIANALAASL AAFAQGIAIE HIRAALTSFR
TSASQTPGRM NLFDLGRFSA LVDYAHNPAG YQAVGDFVLK WPGERIGVVG GPGDRRDEDL
ETLGSLSAQI FDRVIVKEDD DTRGRARGNA AEWIKAGLLQ VKPDYSYEEI LDETTAISKA
LETAPDGSLV VIFPERVSRA IELIETYRLS QGINAAVTNP NGSSNGSTTP SAAATTDSGL
PAPNETVEPL SSTPGNPG
|
|---|
| |