Gene Cyan7425_4747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_4747 
Symbol 
ID7290700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp4834028 
End bp4836853 
Gene Length2826 bp 
Protein Length941 aa 
Translation table11 
GC content55% 
IMG OID643587714 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_002485413 
Protein GI220910102 
COG category[K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000159984 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCTTAA ATGCAGCAGA TTTAGATGCC ATTACCCAGG AGGCACGGAC TTGTTTTCTC 
TACGAAGATG CACCGGAGTA TCTGACCACC CTGGAACAGG GGATGAACCA GATCCATGCC
GAAAATCAGG GAAATCTGCA CAACACTTAC ACTGAGTTGA TGCGGGCCGC CCACTCGCTT
AAGGGGGGAG CCGGGATTGC CCAGTTATCG GTGCTACAGC AGGTGTCCCA CCGGTTGGAG
GATCTGCTGG AGGCTCTACA GGGGCAACGG ATTCAAAATC GCGCCGACCT GGACACCGCC
CATGAACTTC TCAGCCTGGG GGTCGAGCAG ATTCAATTTC TGGTGGCTCA GGCCAGACAA
AATCCGATTC AGGAAACAGA TGAGCGCAGC TTACAATTAA TGGCTTTGCT CGATCAGTGC
CTGGAACAAA TTCCTACCCC TGAGGTGCCT ACCTTCTTAG AGGGAGAACC GCAGAGCGCT
GTGCCGATCA AAATTGTGCA GATGGCGCTG GAAACTGACT TAGAAGACTG TCTGCAACGG
ATTGAAAGCA ATTTAACGGC TCCACCGGCC AGCTTAACCC AAGCTCTGAA CGGATTGGCA
GAGGAATGTA AGTTGTTGGG GCAAACCCTT AGCCTACCCT GGTTGACGGA GCTGGGTGGT
GCGATCGCCC CTGCATTGAG CCAACCTGGT TTCGCCATTC AGGAAGTGGC TACCGCTGTT
TTGGAGGAAA TTCGTCAGCA ACGGCGGGAG TTTTTGCAGA GTTTAACTCC GTCCCCAGCC
CCCACCGCTC CTACCCCCCA GCCCACTACC CCGGAGCTAG GCATTGCAGC CGACTTGATC
GCGGAAGTGC CCCTGGCAGC CGACCCGATC GCAGCCGACT TGATCGCAGA AGTGCCACTA
ACAGCTCCAG AAGTTGAGCT CCCCGCAGCT GCCCCGGCCG TTACCCCCAC CCAGACCCCT
AGTGCCCAGC CTGCCCCCCT GCTCAACCTG AGAATTCCCG TCGCCAAACT GGATCGGCTC
ACCAATACCG TAGGGGAATT ATTGATCAAC CAGGAGCGCC TCAGCCTGTA TCAGTCTCAG
TTTCAGCAGG TCAGTACTAC ACTGAAAAAG CGGGCAGAGC AGTTCTCTCC CATCAAAGAA
CAGGTTCAAA CCTTTTACGA TCGGTTGGCT ACCCCTCTTG CGGCGATCGT TGCCAATTTG
GTTGATACGA GCCCGAGTGG CGAGAAAAGC ACGGGCAGTC CTGAAGAATT TGATGCCCTC
CAGTTTGACC GCTACACCGA ACTGCACAGT ACCTTACTCG ATTTCCAGGA ATTGCTGGCC
CGGATCCAGG AAGTGGGTGC TGACATCGAC CTGCTCAACC GTGACCTCCA GGACGGTTTG
GATCAACTGC GGCAACAATT GAACGGTCTA CGCAGCGAAT TGACCGACTC CCGTTTGCTG
CCCTTCCGCT TTCTGGCCGA GAAGTTTATT CCTGCCTTGC AAACCCTGAA CCGTCGGTAT
GGCAAACAGG TGGAACTGGA CATTATGGGT GGGGATACGC TGATTGATCA GGTGGTGATC
GAGCAACTCA AAACCCCCCT CACTCATCTG TTCCGCAATG CCTTTGACCA CGGGATTGAA
TCGCCTCCAG AGCGACAACA GGCGAATAAA CCTCAAGTTG CTAAAATTCG CCTAGGCGCC
AGGGTACTGG GCAATCAGGT GATGGTGACG ATCGCTGATG ATGGGCGGGG CATTGATCTA
GAAAAAGTTG CACAGCGGGC CGTACAGATG GGACTGGGCA AGGCTTTACA ACTGGAACGG
CTGAGCCGGG ATCAACTGCT GCAGCTTATC TTTACTCCTG GTTTTTCGAC TGCCACGGGG
GTCACTGACC TATCGGGACG GGGGGTCGGG CTGGATGTGG TTAAGCGAGA AGTGGAAAAC
TTGCGGGGAA CGGTACGGGT TGAAACCATG CTCGGACTGG GAACCCAATT TACCCTTAGT
ATTCCCCTCA CCCTCAGTAT TTTACCCCTG CTGCTCTGTC AGTGCCGGGA TGTAGTTCTG
TCTATTCCAT CAGTAAATGT GCTGGAAGTG ATTAATCTAC GGGACTACTG TAACCTGGAA
CAGTCTCCCC AGCAAATCAC CTGGAAAGAC CAAACCATTC CCCTGCGAGA TTTGCTGCAG
CTTTTACCTT ACCAGCGATC GGTTAGCAGT CAGGCTGCAT CCCTGGGCAA GGTGGGCCTG
GTGGTGGAAG CGAATGGTCA ACCCCTGGCC CTGGCTGTCG ATACCTTACT GGAAGAGCGG
GAACTGGTGA TTAAACCGTT TGATGCCACG GTAAAAATTC CCCCTTACCT GATCGGTTGC
TCCGTACTGG GAACGGGCCA GGTGATTCCG GTACTAGCAC CCACCCATTT TGATCAACTC
CTCCGTCAAA CCGCCGCCCC CAGCGCTCCC GTACCCACAA CTGTCAGCGA AAGCCTGACC
GAAACCATTT TGATTGTGGA TGACTCGATC GCTGTCCGGC GCTTGCTGGA ACGGGTTCTG
ACGCAGGGCG GCTATCAGGT CACAGCCTGC CGGGATGGCA AAGAAGCGCT GGAGGAACTC
AATCGCTCTC AGGGAAATAT TGCCATGGTC ATTTCTGACA TTGAGATGCC CCGTCTGGAC
GGTTATGGCT TGTTAAAAGA AATCCGTACC CATCCCCGCT GGCATCGTCT CCCCGTCGCC
ATGCTCACCT CCCGCAGTAG TGATAGCCAC CGTCAGAAAG CAATGGATCT GGGAGCCACC
ACCTATTTCA CCAAACCGTT CCAGGCAACA GAGCTGCTGG CCACCCTGGA TGCTCTGCTC
CATTAA
 
Protein sequence
MGLNAADLDA ITQEARTCFL YEDAPEYLTT LEQGMNQIHA ENQGNLHNTY TELMRAAHSL 
KGGAGIAQLS VLQQVSHRLE DLLEALQGQR IQNRADLDTA HELLSLGVEQ IQFLVAQARQ
NPIQETDERS LQLMALLDQC LEQIPTPEVP TFLEGEPQSA VPIKIVQMAL ETDLEDCLQR
IESNLTAPPA SLTQALNGLA EECKLLGQTL SLPWLTELGG AIAPALSQPG FAIQEVATAV
LEEIRQQRRE FLQSLTPSPA PTAPTPQPTT PELGIAADLI AEVPLAADPI AADLIAEVPL
TAPEVELPAA APAVTPTQTP SAQPAPLLNL RIPVAKLDRL TNTVGELLIN QERLSLYQSQ
FQQVSTTLKK RAEQFSPIKE QVQTFYDRLA TPLAAIVANL VDTSPSGEKS TGSPEEFDAL
QFDRYTELHS TLLDFQELLA RIQEVGADID LLNRDLQDGL DQLRQQLNGL RSELTDSRLL
PFRFLAEKFI PALQTLNRRY GKQVELDIMG GDTLIDQVVI EQLKTPLTHL FRNAFDHGIE
SPPERQQANK PQVAKIRLGA RVLGNQVMVT IADDGRGIDL EKVAQRAVQM GLGKALQLER
LSRDQLLQLI FTPGFSTATG VTDLSGRGVG LDVVKREVEN LRGTVRVETM LGLGTQFTLS
IPLTLSILPL LLCQCRDVVL SIPSVNVLEV INLRDYCNLE QSPQQITWKD QTIPLRDLLQ
LLPYQRSVSS QAASLGKVGL VVEANGQPLA LAVDTLLEER ELVIKPFDAT VKIPPYLIGC
SVLGTGQVIP VLAPTHFDQL LRQTAAPSAP VPTTVSESLT ETILIVDDSI AVRRLLERVL
TQGGYQVTAC RDGKEALEEL NRSQGNIAMV ISDIEMPRLD GYGLLKEIRT HPRWHRLPVA
MLTSRSSDSH RQKAMDLGAT TYFTKPFQAT ELLATLDALL H