| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_4130 |
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| Symbol | |
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| ID | 7290081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011884 |
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| Strand | - |
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| Start bp | 4176852 |
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| End bp | 4178750 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643587104 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_002484805 |
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| Protein GI | 220909494 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000139923 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCTGA GTGAAATTAC CCATCCCAAC CAACTGCACG GGCTGTCGAT TCAGGAATTA
AAACAAATTG CCCGCCAGAT TCGGGATAAA CATCTGGAAA CCGTAGCGGC GACCGGTGGC
CATCTCGGGC CGGGGTTGGG CGTGGTGGAA TTGACCCTGG GGCTCTACCA AACCCTGGAT
TTAGACCGGG ATCGGGTGAT TTGGGATGTG GGTCACCAGG CTTATCCGCA CAAGCTGTTG
ACCGGCCGCT ACGATCGCTT CCATACCCTG CGCCAGAAAG ATGGGGTTGC GGGTTATCTG
AATCGCAAGG AAAGCGAGTT TGACCATTTC GGGGCAGGTC ATGCCTCCAC CAGTATCTCT
GCGGCTTTGG GAATGGCCCT GGCCCGTGAT CAGCGGGGAG AAACCCACAA AGTCGTTGCC
ATCATTGGGG ATGGAGCGTT AACAGGGGGA ATGTCCCTGG AAGCCATCAA CCACGCTGGC
CACCTGCCCC ACACCAACTT AATGGTTGTC CTCAACGATA ACGAGATGTC GATTTCCCCC
AATGTTGGGG CCCTGTCTCG CTATCTGAAT AAAATGCGGC TCAATCCTCA GGTGCAATTC
ATTACCGAGA ATCTGGAAGA GCAGATCAAA CACTTTGTAG GCGACTCAAT TACGCCGGAA
CTGGGACGGC TGAAGGGGGG GATGAAACGG CTGGCGGTTC CCAAAGTGGG TGCGGTGTTT
GAGGAACTGG GCTTTACCTA TGTGGGACCA GTGGATGGCC ACAATCTGGA AGAGTTAATT
GCTACCTTCA ACGCGGCTCA CAAAATTCCT GGCCCGGTGC TGGTCCATGT CGCCACGGTC
AAGGGTAAAG GCTATGCGAT CGCTGAAAAG GATCAGGTGG GTTACCATGC CCAAAATCCC
TTCAACCTGG CCACGGGCAA AGCGATGCCC TCCAGCAAGC CCAAGCCGCC CAGCTACTCC
AAGGTGTTTG GCGATACCCT AACCAAATTA GCTGAAGCTG ACTCCCGCAT TATTGGAATT
ACGGCAGCAA TGGCCACGGG GACGGGACTG GATATTCTCC AGAAACACCT GCCCGATCAG
TACATTGATG TCGGTATTGC CGAACAGCAT GCTGTTACTA TGGCTGCCGG GTTGGCCTGT
GAAGGCATGC GGCCCGTCGT CACTATTTAT TCCACCTTTT TGCAACGGGC CTACGACCAG
ATTGTCCATG ATGTCTGCAT CCAGAGCTTA CCCGTCCTCT TCTGTATGGA TCGGGCCGGC
ATTGTTGGTG CGGATGGTCC CACCCATCAG GGCATGTACG ACATTGCCTA CCTGCGCTGT
CTACCCAACA TGGTCCTGAT GGCCCCCAAA GATGAAGCGG AACTACAGCA GATGCTGGTT
ACGGGTATTA ACTACATGGA TGGCCCGATC GGCCTGCGCT ATCCCCGTGG GAATGGTTAT
GGTGTCGCCC TGATGGAAGA AGGTTGGGAA CCCCTGCCGA TCGGTAAAGC CGAAGTGTTG
CGTCAGGGAG ACGATTTGCT GATGCTGGCT TACGGTTCAA TGGTTTACCC TACCCTGCAG
GCTGCTGAAA TTCTACGGGA ACATGGAATT GCTGCCACTG TGGTCAATGC TCGCTTTGCC
AAACCCCTGG ATACTGAGTT GATCCTTCCC CTGGCTGAAA AGCTGGGACG GGTAGTGACC
GTGGAGGAAG GGTGTCTGAT CGGTGGCTTT GGTTCAGCCG TGCTGGAAGC TTTACAGGAC
CAGGAGATCC TCGTGCCCGT CACCCGGATT GGCATTCCCG ATATTCTGGT GGAACACGCT
ACACCTGACC AATCAAAAGC CCAACTGGGA TTAACCAGCG CTCAGATTGC GGAGCGGGTA
TTAGCGAAAA CCCAACAACC AGCCCCTAGT CGGGTCTAA
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| Protein sequence | MHLSEITHPN QLHGLSIQEL KQIARQIRDK HLETVAATGG HLGPGLGVVE LTLGLYQTLD
LDRDRVIWDV GHQAYPHKLL TGRYDRFHTL RQKDGVAGYL NRKESEFDHF GAGHASTSIS
AALGMALARD QRGETHKVVA IIGDGALTGG MSLEAINHAG HLPHTNLMVV LNDNEMSISP
NVGALSRYLN KMRLNPQVQF ITENLEEQIK HFVGDSITPE LGRLKGGMKR LAVPKVGAVF
EELGFTYVGP VDGHNLEELI ATFNAAHKIP GPVLVHVATV KGKGYAIAEK DQVGYHAQNP
FNLATGKAMP SSKPKPPSYS KVFGDTLTKL AEADSRIIGI TAAMATGTGL DILQKHLPDQ
YIDVGIAEQH AVTMAAGLAC EGMRPVVTIY STFLQRAYDQ IVHDVCIQSL PVLFCMDRAG
IVGADGPTHQ GMYDIAYLRC LPNMVLMAPK DEAELQQMLV TGINYMDGPI GLRYPRGNGY
GVALMEEGWE PLPIGKAEVL RQGDDLLMLA YGSMVYPTLQ AAEILREHGI AATVVNARFA
KPLDTELILP LAEKLGRVVT VEEGCLIGGF GSAVLEALQD QEILVPVTRI GIPDILVEHA
TPDQSKAQLG LTSAQIAERV LAKTQQPAPS RV
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