Gene Cyan7425_4028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_4028 
Symbol 
ID7289976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp4061000 
End bp4061965 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content52% 
IMG OID643587000 
Product30S ribosomal protein S1 
Protein accessionYP_002484703 
Protein GI220909392 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.861757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00019437 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCAATC AGGAAACAAA AGCACCAACG ATTGGCTTTA CACACGAAGA TTTTGCGGCC 
CTTCTCGATA AATATGACTA TCACTTCAGC CCCGGCGATG TTGTGCCTGG CACAGTGTTT
AGCATAGAAC CCAAAGGTGC TTTGATTGAC ATTGGTGCTA AAACCGCAGC CTTTATTCCC
ATTCAGGAAA TGTCAATTAA CCGGATTGAT AGTCCGGAGG AAGTGCTGCG CTCTAACGAA
ACGCGGGAAT TCTTCATTCT TGCCGATGAA AACGAAGACG GCCAGCTCAC CCTCTCCATC
CGGCGGATTG AGTACATGCG TGCCTGGGAG CGGGTCCGAC AACTGCAGGC GGAAGATGCC
ACAGTGCGAT CGGCCGTGTT TGCCACCAAC CGGGGGGGAG CCTTAGTCCG CATTGAAGGA
CTGCGTGGTT TTATTCCCGG TTCCCACATC AGCACCCGGG TGACGAAGGA AGATCTGGTG
GGTGAAGAAC TGCCCCTCAA GTTTCTAGAA GTAGATGAAG AGCGCAACCG TCTGGTGTTG
AGCCATCGCC GTGCCTTGGT GGAACGGAAG ATGAACAAGC TGGAAGTGGG CGAGGTCGTA
ATTGGTACGG TGCGGGGGAT CAAACCCTAT GGTGCCTTTA TCGATATTGG CGGGGTCAGT
GGTCTGCTGC ACATCTCCGA AATTTCCCAC GATCACATCG ATACTCCCCA TAGCGTCTTT
AACGTCAATG ATGAAGTTAA GGTGATGATC ATTGACCTGG ATGCCGAGCG GGGCCGCATT
TCGCTCTCGA CCAAGCAATT GGAGCCGGAA GCGGGGGATA TGGTGAAGAA TCCGCAACTG
GTTTATGAAA AAGCGGAAGA AATGGCAGCG AAGTATCGGG AGCAGATGTT TGCCCAGGCT
GCCCCCACCG CTAGTGCTGA AGTTGAAGTT GAAGAGATTC CAGTGGCTTC CGAGGAGGAA
GAGTAG
 
Protein sequence
MINQETKAPT IGFTHEDFAA LLDKYDYHFS PGDVVPGTVF SIEPKGALID IGAKTAAFIP 
IQEMSINRID SPEEVLRSNE TREFFILADE NEDGQLTLSI RRIEYMRAWE RVRQLQAEDA
TVRSAVFATN RGGALVRIEG LRGFIPGSHI STRVTKEDLV GEELPLKFLE VDEERNRLVL
SHRRALVERK MNKLEVGEVV IGTVRGIKPY GAFIDIGGVS GLLHISEISH DHIDTPHSVF
NVNDEVKVMI IDLDAERGRI SLSTKQLEPE AGDMVKNPQL VYEKAEEMAA KYREQMFAQA
APTASAEVEV EEIPVASEEE E