| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_3999 |
|---|
| Symbol | |
|---|
| ID | 7289947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 4033437 |
|---|
| End bp | 4034600 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643586971 |
|---|
| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
|---|
| Protein accession | YP_002484674 |
|---|
| Protein GI | 220909363 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
|---|
| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000000436742 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGCAA TTACTCTGCT CGGTTCTACT GGTTCGATTG GCACCCAAAC CCTGGACATC
GTGGCGCAGT ACCCGGATCA GTTTCGGATT GTGGGGCTGG CGGCGGGTCG CAGCTTAGAT
AAACTGATTC CCCAGATTCG CCAGTTTCGG CCTCAGATTG TGGCCCTAGC AGATGAACAG
CAGTTAGACG ATCTGAAGGC GGCGATTGCT GATCTAGATC CCCAACCGAT TTTAGTGGCC
GGCCCAGCGG GAGTCTGTGA GGTGGCGGCC TACGGGGATG CGAAAACCGT GGTGACGGGA
ATTGTGGGCT GTGCCGGACT ATTACCGACG ATCGCGGCGA TCAAAGCCGG AAAGGACATT
GCTTTAGCCA ATAAAGAAAC CCTGATTGCT GGGGGACCTG TCGTGCTGCC CTTAGTCGAA
CAGTATGGGG TGAAGCTGCT CCCCGCGGAT TCAGAGCATT CTGCTATTTT TCAGTGTTTA
CAGGGGGTTC CTGCCGGGGG ATTACGGCGG ATTCTCCTGA CTGCCTCCGG GGGAGCCTTT
CGGGATTGGC CGGTGGATAA ACTGGGGCAG GTGACCATTG CCGATGCGCT CAAACATCCC
AACTGGTCGA TGGGGCAAAA GATCACCGTC GATTCTGCCA CCCTGATGAA TAAAGGGTTG
GAAGTGATTG AAGCCCACTA TTTATTTGGT CTGGACTACG ATCACATTGA AATTATTATC
CATCCCCAGA GTATTATTCA CTCCCTGATT GAGGTTCAGG ATACCTCCGT GCTGGCTCAA
CTGGGCTGGC CGGATATGCG GCTTCCCGTC CTCTATGCCA TGTCTTGGCC GGAACGGATT
GCCACGGATT GGCCCCGTCT CGACCTGCTG AAAGCTGGGG ATCTCACTTT CAAGGAGCCG
GATCATGCCA AGTATCCCTG TATGAAATTA GCCTACGCAG TGGGCCGGGC TGGGGGAGCA
ATGCCAGCGG TGTTGAATGC CGCCAATGAA CAGGCAGTGG CTTTATTCCT GGCAGAACGG
ATTGCTTTTC TGGACATTCC CCGTTTAATT GAGCAAACCT GCGATCGGTT TAGCAGCAAA
AACTGTGCGG AACCCAGTCT GGAGGATATT TTGGCTGCGG ATCAATGGGC GCGACAGGAA
GTGCTGCTGG CCAGTCAGAA TTGA
|
|---|
| Protein sequence | MKAITLLGST GSIGTQTLDI VAQYPDQFRI VGLAAGRSLD KLIPQIRQFR PQIVALADEQ
QLDDLKAAIA DLDPQPILVA GPAGVCEVAA YGDAKTVVTG IVGCAGLLPT IAAIKAGKDI
ALANKETLIA GGPVVLPLVE QYGVKLLPAD SEHSAIFQCL QGVPAGGLRR ILLTASGGAF
RDWPVDKLGQ VTIADALKHP NWSMGQKITV DSATLMNKGL EVIEAHYLFG LDYDHIEIII
HPQSIIHSLI EVQDTSVLAQ LGWPDMRLPV LYAMSWPERI ATDWPRLDLL KAGDLTFKEP
DHAKYPCMKL AYAVGRAGGA MPAVLNAANE QAVALFLAER IAFLDIPRLI EQTCDRFSSK
NCAEPSLEDI LAADQWARQE VLLASQN
|
|---|
| |