Gene Cyan7425_3980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_3980 
Symbol 
ID7289927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp4012830 
End bp4013729 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content51% 
IMG OID643586952 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002484656 
Protein GI220909345 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00655631 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAGC AGCTTGCTCA CAGATCTGGC TTGATTCTCC AGGGTCTCAC CCCCTACCTC 
TTTTTACTGC CCGCTCTGGC AATCTTGAGC TTAACGGTGT TCTGGCCAGC AGTGCAGGCG
TTTTATCTCA GTTTTACCCG CTACGAGCTG GATCTGACCC AACCTCCCAT CTGGATTGGA
CTGGACAATT TTCAAAAACT CTGGCGCGAT CGCGTCTTCT GGCAAACCCT GGGTAATTCT
TTGCTGTATC TCATCGGAGT GGTCCCAATT CTGGTGATCG CTCCCCTCGG TCTGGCCATT
TTAGTGAATC AAAAATTGCG GGGCATGCAC TGGTTCCGTA CCGCCTACTA CACTCCGGTG
ATCATCTCCA TGGTGGTGGC GGGGATTGCC TGGAAATGGA TCTATGCCCA GAATGGCCTG
CTGAATGGGG TGCTGAAACA ACTGGGGCTA GTGGCAACTG CAATTCCCTG GCTGACCAGT
CCCCAACTGG CTTTGTTCAG TGTGATGGCG GTAACGATCT GGAAGGGCCT GGGCTACTAC
ATGGTGATCT ATCTGGCGGG GTTACAGGCT ATTCCAGCTG AACTCTATGA AGCAGCGGCG
ATCGATGGTT CTGATGGCTG GCAAAAACAC CGGGATATTA CCGTTCCCCT CATGCGCCCT
TACCTGTCAC TGGTGGCGGT AATTTCAGCG ATTTCTGCGA CAAAGGTGTT TGAAGAAGTG
TACATCATGA CTCAGGGGGG ACCGCTAAAC AGTTCCAAAA CGATCGTTTA TTACCTCTAT
GAACAGGCGT TTCAAAAACT GGAAATGAGC TATGCCTGCA CGATCGGCTT AGTGCTATTT
CTGCTCATGC TGGGCCTGTC AATTTTGAAT TTGAAATTAG GCCGCGGACA ACCTGTTTAA
 
Protein sequence
MKKQLAHRSG LILQGLTPYL FLLPALAILS LTVFWPAVQA FYLSFTRYEL DLTQPPIWIG 
LDNFQKLWRD RVFWQTLGNS LLYLIGVVPI LVIAPLGLAI LVNQKLRGMH WFRTAYYTPV
IISMVVAGIA WKWIYAQNGL LNGVLKQLGL VATAIPWLTS PQLALFSVMA VTIWKGLGYY
MVIYLAGLQA IPAELYEAAA IDGSDGWQKH RDITVPLMRP YLSLVAVISA ISATKVFEEV
YIMTQGGPLN SSKTIVYYLY EQAFQKLEMS YACTIGLVLF LLMLGLSILN LKLGRGQPV