Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_3980 |
Symbol | |
ID | 7289927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | + |
Start bp | 4012830 |
End bp | 4013729 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643586952 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002484656 |
Protein GI | 220909345 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00655631 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAGC AGCTTGCTCA CAGATCTGGC TTGATTCTCC AGGGTCTCAC CCCCTACCTC TTTTTACTGC CCGCTCTGGC AATCTTGAGC TTAACGGTGT TCTGGCCAGC AGTGCAGGCG TTTTATCTCA GTTTTACCCG CTACGAGCTG GATCTGACCC AACCTCCCAT CTGGATTGGA CTGGACAATT TTCAAAAACT CTGGCGCGAT CGCGTCTTCT GGCAAACCCT GGGTAATTCT TTGCTGTATC TCATCGGAGT GGTCCCAATT CTGGTGATCG CTCCCCTCGG TCTGGCCATT TTAGTGAATC AAAAATTGCG GGGCATGCAC TGGTTCCGTA CCGCCTACTA CACTCCGGTG ATCATCTCCA TGGTGGTGGC GGGGATTGCC TGGAAATGGA TCTATGCCCA GAATGGCCTG CTGAATGGGG TGCTGAAACA ACTGGGGCTA GTGGCAACTG CAATTCCCTG GCTGACCAGT CCCCAACTGG CTTTGTTCAG TGTGATGGCG GTAACGATCT GGAAGGGCCT GGGCTACTAC ATGGTGATCT ATCTGGCGGG GTTACAGGCT ATTCCAGCTG AACTCTATGA AGCAGCGGCG ATCGATGGTT CTGATGGCTG GCAAAAACAC CGGGATATTA CCGTTCCCCT CATGCGCCCT TACCTGTCAC TGGTGGCGGT AATTTCAGCG ATTTCTGCGA CAAAGGTGTT TGAAGAAGTG TACATCATGA CTCAGGGGGG ACCGCTAAAC AGTTCCAAAA CGATCGTTTA TTACCTCTAT GAACAGGCGT TTCAAAAACT GGAAATGAGC TATGCCTGCA CGATCGGCTT AGTGCTATTT CTGCTCATGC TGGGCCTGTC AATTTTGAAT TTGAAATTAG GCCGCGGACA ACCTGTTTAA
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Protein sequence | MKKQLAHRSG LILQGLTPYL FLLPALAILS LTVFWPAVQA FYLSFTRYEL DLTQPPIWIG LDNFQKLWRD RVFWQTLGNS LLYLIGVVPI LVIAPLGLAI LVNQKLRGMH WFRTAYYTPV IISMVVAGIA WKWIYAQNGL LNGVLKQLGL VATAIPWLTS PQLALFSVMA VTIWKGLGYY MVIYLAGLQA IPAELYEAAA IDGSDGWQKH RDITVPLMRP YLSLVAVISA ISATKVFEEV YIMTQGGPLN SSKTIVYYLY EQAFQKLEMS YACTIGLVLF LLMLGLSILN LKLGRGQPV
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