Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_3649 |
Symbol | ispG |
ID | 7289593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | + |
Start bp | 3624403 |
End bp | 3625626 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643586624 |
Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
Protein accession | YP_002484330 |
Protein GI | 220909019 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000025402 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACCC TGTCCGCTCC TGATATCTCC AGTTCCAAAC CCGCAGCCCT AACTGAAGCT ACAATTGTTC GCCGCAAAAC TCGTCCTGTT CCCGTTGGCA GTATCACGAT CGGGGGAGGA AACCCAGTGG TGGTGCAATC GATGATCAAC GAGGACACCT TAGATATTGA GGGTTCCGTT GCTGCCATTC GTCGTTTGCA TGAAATCGGC TGTGAAATTG TGCGGGTAAC GGTTCCCAGT ATGGCCCACG CCAAAGCGAT GGCAGAAATT CGGGCTAAAC TTCATCGCAC CTACAAGCCC GTCCCTCTGG TGGCGGATGT ACACCACAAT GGTCTGAAAA TTGCCCTGGA AGTGGCCAAC CACGTCGATA ATGTGCGGAT TAATCCCGGA CTGTATGTGT TTGAGAAGCC TAAAGCCGAT CGGACAGAAT ACACCCAGGC GGAATTTGAC GAAATTGGTG CCAAAATTCG CGAAACCCTT GAACCTCTGG TGCTGAGCCT GAAAACCCAG AATAAGTCCA TGCGCATTGG GGTCAATCAT GGATCTTTAG CGGAACGGAT GCTGTTTACC TACGGCGATA CCCCGGAAGG AATGGTGGAG TCAGCACTGG AATTTATCCG CATCTGTGAA TCTCTGGGCT ACTACCATCT GGAAATTTCC CTCAAAGCTT CCCGTGTCCC CGTTATGCTG GCGGCTAATC GTCTGATGGT GCAACGGATG GATGAGCTGG GAATGGACTA TCCACTCCAT TTGGGAGTCA CAGAAGCAGG AGATGGCGAG TATGGTCGGA TCAAGTCCAC AGCAGGAATT GGCACCCTGT TAGCAGAAGG CATCGGCGAT ACCATTCGGG TCTCCCTGAC TGAGGCTCCC GAAAAAGAAA TCCCCGTTTG CTATAGCATT TTGCAAGCCC TCGGTCTGCG CAAAACGATG GTGGAGTACG TCGCCTGTCC CTCCTGCGGC CGGACCTTGT TTAACCTGGA AGAAGTGCTG CATAAAGTGC GGGAAGCCAC CAAGCATCTC ACGGGTCTGG ATATTGCGGT GATGGGTTGT ATTGTCAACG GTCCCGGAGA AATGGCCGAT GCGGATTATG GCTACGTCGG TAAGCAGGCG GGTCATATTT CCCTCTACCG GGGGCGCGAG GAAGTGAAAA AAGTACCTGA AGATCAGGGT GTTGAGGAGT TAATTAATCT GATCAAAGCT GACGGACGTT GGGTCGATCC CTAA
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Protein sequence | MQTLSAPDIS SSKPAALTEA TIVRRKTRPV PVGSITIGGG NPVVVQSMIN EDTLDIEGSV AAIRRLHEIG CEIVRVTVPS MAHAKAMAEI RAKLHRTYKP VPLVADVHHN GLKIALEVAN HVDNVRINPG LYVFEKPKAD RTEYTQAEFD EIGAKIRETL EPLVLSLKTQ NKSMRIGVNH GSLAERMLFT YGDTPEGMVE SALEFIRICE SLGYYHLEIS LKASRVPVML AANRLMVQRM DELGMDYPLH LGVTEAGDGE YGRIKSTAGI GTLLAEGIGD TIRVSLTEAP EKEIPVCYSI LQALGLRKTM VEYVACPSCG RTLFNLEEVL HKVREATKHL TGLDIAVMGC IVNGPGEMAD ADYGYVGKQA GHISLYRGRE EVKKVPEDQG VEELINLIKA DGRWVDP
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