| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_3580 |
|---|
| Symbol | |
|---|
| ID | 7289522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 3540569 |
|---|
| End bp | 3544855 |
|---|
| Gene Length | 4287 bp |
|---|
| Protein Length | 1428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643586554 |
|---|
| Product | multi-sensor hybrid histidine kinase |
|---|
| Protein accession | YP_002484262 |
|---|
| Protein GI | 220908951 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.506123 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.532587 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTTG ATTTGTTGTT TTCCCCCTCC TTGCCGCTAG CCCAGGTGAT TGATCCCGCT
CCTTTATGCG TTCCTCCAGA AACCTCTGTC CTGGAAGTCA TTCGCTTGAT GCATCAAACC
GGCAAATGTG CGCTGGTGAT AGCGGAGACC CAACTATGCG GCATTTTCAG CCATCAGGAC
GTGGTCAGAG CGGCTGCCAC AGGTATGGAT TTGACTGCTA CGCCGATCGC GGAGGTGATG
ACCCAACCAG TGGTGACGTT GGCCTGGTCT GCAGAAATGA CGCTCCAGAC GGCTTTATCC
GGGATGGCAG AGCATCAGAT CCACCACCTG CCTGTTCTGA ACCAAGACGA TCGTCTGATC
GGCTTACTCA CCCAGGATGC TTTACTTCAG GGCCTTGCCC GTAAACCCCA ACCCATCCCA
TCCCTTAACC CCTCCCCACC TGCTCAATCC GCTCAGACCT ACCCTGATCG AGGGATGGAT
AAGGACGTGC TAGAGCAGCA ATGGAAAGCA TTGTTTGATC ATGCCTTAGA TGCTATTTTG
ATCGCGGATG ACCAGGGTTG CTATCTGGAT GCCAATCCGG CCGCCTGTCA GTTGTTGGGG
CTATCCAAAG CAGAACTATT GAGTTCCTGT GTTGCCGATT TTGCCGATCC AGCCGTGGAG
ATTACTCAAC TCTGGCAAAA ATTTATCCGG CAAGGGCAAA TGCTGGGAGA GTTTAGGCTG
CGCTGTCCTG ATGGTACGGT TCGGCAAACT GAATTTGCAG CGATCGCTAA CTTTATCCCC
GGTCGTCATC TGTCAATTCT GCGAGATATC AGTGCAAGAG TGGAGCTGGA GGCCGAACGC
AAACGCACGG AAGTTAATCT GCAAGCCAGT GAAGCCAAAT TCCGTCTCCT GACCGAGCAT
TTGCGAGATG CTTTTTTCAT CTGTAGCCCC AACCTGGAGC GTTACCTTTA CATCAGCCCG
GCGGTGGAGA AAATCTGGGG CATCACAACT ACAGAAATTT ATCAAAATCC GCGCAGTTGG
CTCGAGCAAG TTCATCCTGA AGATTGGGAT TATTTTATTG CTAACACTTC CCTGGACGGG
CACTTTGAGG ACTACGACCT GGAGTATCGA ATTATCCGCC CGGATGGTGA AGTCCGTTGG
GTGCATGTTC GCGCTTACCC GTTGACGAGT ACCCAGGGGC AGATAGAGCA AATGGTTGGT
GTTTGTGAAG ATATTAGCGA TCGCAAAAAA GCAGAACTTG AACTCATCGA GCGCGAAGCA
TTTCTCAGCA GTATTTATGA TGGAGCAGAT CAGGCAGTTT TTGTCATTGA TGTGACTGAA
AGCCACGACT TTTACTACGT TGCTTTTAAC CGTTTGGCTG AACAGTATGC CGGAATGAGT
TCTCAGGAAG TTGCGGGAAA AACACCGGAA CAAGCCTTTG GGCCGGTCAC TGGAGCCGCC
TTTCGCCAGA ACTATGAACG TTGTTTGCAA ATAGGCACCC TTTCCTATGA AGAGGAAGTC
GTCCTGGCAA CCCATACGGT CTGGACCTTA ACCACCCTTT CGCCCTTACG CAATCAACAG
GGAGCAATCT ATCGCATTGT TGGAACTGCG GTTGATATTA GCGATCGCAA ACAATTGGAG
CTTTCCCTTC AGGCTTCAGA ACGGAAACTA AGTCAAATTT TGGATCGAAC GCTCGCCTCG
ATCACGATCT TTCGCATCTT TGCTAACCGG GATTGGGAAT ATGAATACTT CTCCGCAGGT
TGCGAGAAAC TCTTTGGCTA TAAGTGCCAG GAATTAATCG CAGATAAACT GCTGTGGATG
TCACGGGTTT TTCCACCGGA TCGAGAGACG ATTTTGATGC CGATGTTTGA CACCCTTTTA
ATTGAGGGTA ATACGACCGC TGAGTATCGC TTTTATCACA GAGATGGCTC TCTCCGCTGG
ATTTCCAGTG CCTATGCGGC TGAACAGATC GCCCCTGATT GCTGGAGGAT CACAACCTTA
TGTCAGGACA TTACCGATCG CAAACAAGCT GAACTGCAAT TAAGGGAATT AAATAATGCT
CTGACGAACA CGGTGGAAGG TATTTCTCGG CTCGATCCCC AGGGCCACTA CACTTTTGTG
AATCAGTCCT ATGCTGACAT GATGGGCTAT ACAGCGGCAG AAATGCTGGG ACAGCACTGG
CACATCACCG TTTATCCTGA TGATCGCGAA GCTGCATTGG CTGCCTATGA GCAGATGCGC
AGTTGGGGTA AAGCGAAACT AAAATCCAGG GGACTTCGTA AAGATGGGGC TGTGTTTCAT
CGCCGCATTG TTATGGTTGC TGTTTATGAC GATCAAGAGT CCTTCAGCGG GCATTACTGC
TTTATGGAGG ATGTGACCGA TAAAATGCAA CTGAAAACCG AGCGAGCAAA AGTAGAACTA
GCCCTGCGTG AAAGTGAAGA ACGGTTCCGT ACCCTCAGTG CTGCTGCTCC GATCGGGATT
TGCCAGGCAG ACCTCGATGG GAATTGCCTC TATACCAATG CCCGCTGGCA GGAAATGTCT
GGGCTTAGCT TTGAGGACTC CCTGGGTCAG GGCTGGGTTC AGGCAATTTA TCCAGACGAT
CGTTCAACTC TGTCTGCTGC CTGGGCAGCT TATGTTCGCG GCGAATGTGA CCACTTGCCT
GACTTTCGCT TGTTAACCCC AGAGGGAAAA ATTCGCTGGG TGTCAACCTG TGTGGGGGCA
ATCAAATCTT CAACTGGTGA AATTATTGGC TATGTCAGCA CGGATGAAGA TATTACCGAG
CGCAAGCAAG CAGAACAGGC CCTGCAAGAC AGCCAGCAAA GATTCCAGAC TATCTTAGAT
AATTCTCCTA CCGCCATCTA TCTCCTCGAT CCCCAAAATA ATTTTCTACT GGCCAATCGT
GTTTGTGCAG AACATGTTTC TCTTACTCCA GAGGATTTGG TTGGTAAGAG TATCTATGAA
TTTTGGCCAA GAGAGATTGC TGATGTTTTT GCTGCCAATA ACCAAACCGT ATTTGAAACG
GGTCAATTGC TGCAACTTGA AGAAGTTGTA CCTCACCTGG ATGGACAGCA GCGTACCTAC
ATTACGGTCA AGTTCCCCCT CCGCGATTTA ATGGGTAACC CCTATGCCAT CTGTGGGATT
TCGACGGATA TCAGCGAAAC GAAAGAGCTG GAGTCCCAAT TTTTGCGGGC CCAACGGCTA
GAAAGTATTG GCACCCTGGC CAGTGGCATT GCCCACGATT TGAATAACAT GCTCACCCCG
ATTCTGGTCA GTAGCCAACT GCTCCAGAGA CAGTTACCCG AAGGACGGCC GCAGGAACTC
CTCAAGATCA TGGAGGCTAA TGCCCGGCGG GGCGCAGACT TAATTCGGCA AGTCCTTACC
TTTGCTCGGG GGACCGAAGG AAAACGGATG CCCCTGCAGA TCAAACATTT GTTAACGGAA
ATTCAGCAGA TTTGTGAGCG GACCTTCCCC AAATCGATCA GGATCGCCCT GGATATTCCT
GCCGACCTGG CTATGATATC TGTCGATCCC ACCCAACTCC ACCAGGTGCT CATGAACTTA
TGTGTAAATG CCCGCGATGC CATGCCTGAG GGAGGACAAC TGAACCTGCG GGCTGCAGAC
TTCTATGCCG ATCAGACCTA CAGGCAGATG AATCTGGAGG CTCAGGTGGG GGCCTATGTC
GTGATTACGG TCGAGGATAC GGGGATGGGG ATGGACTCAG ATGTGCTGGA ACGGATTTTC
GATCCTTTCT TCACCACTAA AGGGGTCGGG CAGGGGACGG GGTTAGGTCT GTCGGTGGTT
CAGGGCATTA TTCGCAGCCA TAGTGGGTTT ATCAAGGTCA ACAGCAGTAT CGGTCAGGGC
ACCCAATTCC AGGTCTATCT GCCCGCCATT ATGGCTAAGG AAGAGGTGGC TAGCTCAGAA
CCAGAACTAC TGTTGGGGCG GGGTGAATTG ATCCTGCTTG TGGATGATGA AGCCAATTTG
CTCACCATCA CCAAAACTCT GCTGGAAGAC TGCAATTACC GCGTGATGAC GGCTAGCAAT
GGTGTGGAAG CGATCGCCCT CTATGCCCAG CATCAGAATG AGATTGGTGC CGTGCTAATG
GATATGGTCA TGCCTGGGAT GGATGGGGCG AAAACTATTG GGGCCTTGAG GAAAATTAAT
CCCCTGGTCA AAATTGTGGC CTCCAGTGGT CTGACAGCAC GGCTGCAGGG GCAAGACCTG
GTTAGCATGG AGATCAATGC TACTTTGGCT AAACCTTATA CAGCCCATGA ATTACTCCTA
CTCCTGGATG GGTTGCTAAG GCATTGA
|
|---|
| Protein sequence | MSFDLLFSPS LPLAQVIDPA PLCVPPETSV LEVIRLMHQT GKCALVIAET QLCGIFSHQD
VVRAAATGMD LTATPIAEVM TQPVVTLAWS AEMTLQTALS GMAEHQIHHL PVLNQDDRLI
GLLTQDALLQ GLARKPQPIP SLNPSPPAQS AQTYPDRGMD KDVLEQQWKA LFDHALDAIL
IADDQGCYLD ANPAACQLLG LSKAELLSSC VADFADPAVE ITQLWQKFIR QGQMLGEFRL
RCPDGTVRQT EFAAIANFIP GRHLSILRDI SARVELEAER KRTEVNLQAS EAKFRLLTEH
LRDAFFICSP NLERYLYISP AVEKIWGITT TEIYQNPRSW LEQVHPEDWD YFIANTSLDG
HFEDYDLEYR IIRPDGEVRW VHVRAYPLTS TQGQIEQMVG VCEDISDRKK AELELIEREA
FLSSIYDGAD QAVFVIDVTE SHDFYYVAFN RLAEQYAGMS SQEVAGKTPE QAFGPVTGAA
FRQNYERCLQ IGTLSYEEEV VLATHTVWTL TTLSPLRNQQ GAIYRIVGTA VDISDRKQLE
LSLQASERKL SQILDRTLAS ITIFRIFANR DWEYEYFSAG CEKLFGYKCQ ELIADKLLWM
SRVFPPDRET ILMPMFDTLL IEGNTTAEYR FYHRDGSLRW ISSAYAAEQI APDCWRITTL
CQDITDRKQA ELQLRELNNA LTNTVEGISR LDPQGHYTFV NQSYADMMGY TAAEMLGQHW
HITVYPDDRE AALAAYEQMR SWGKAKLKSR GLRKDGAVFH RRIVMVAVYD DQESFSGHYC
FMEDVTDKMQ LKTERAKVEL ALRESEERFR TLSAAAPIGI CQADLDGNCL YTNARWQEMS
GLSFEDSLGQ GWVQAIYPDD RSTLSAAWAA YVRGECDHLP DFRLLTPEGK IRWVSTCVGA
IKSSTGEIIG YVSTDEDITE RKQAEQALQD SQQRFQTILD NSPTAIYLLD PQNNFLLANR
VCAEHVSLTP EDLVGKSIYE FWPREIADVF AANNQTVFET GQLLQLEEVV PHLDGQQRTY
ITVKFPLRDL MGNPYAICGI STDISETKEL ESQFLRAQRL ESIGTLASGI AHDLNNMLTP
ILVSSQLLQR QLPEGRPQEL LKIMEANARR GADLIRQVLT FARGTEGKRM PLQIKHLLTE
IQQICERTFP KSIRIALDIP ADLAMISVDP TQLHQVLMNL CVNARDAMPE GGQLNLRAAD
FYADQTYRQM NLEAQVGAYV VITVEDTGMG MDSDVLERIF DPFFTTKGVG QGTGLGLSVV
QGIIRSHSGF IKVNSSIGQG TQFQVYLPAI MAKEEVASSE PELLLGRGEL ILLVDDEANL
LTITKTLLED CNYRVMTASN GVEAIALYAQ HQNEIGAVLM DMVMPGMDGA KTIGALRKIN
PLVKIVASSG LTARLQGQDL VSMEINATLA KPYTAHELLL LLDGLLRH
|
|---|
| |