| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_3561 |
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| Symbol | |
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| ID | 7289503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011884 |
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| Strand | + |
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| Start bp | 3516460 |
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| End bp | 3519615 |
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| Gene Length | 3156 bp |
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| Protein Length | 1051 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643586535 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_002484243 |
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| Protein GI | 220908932 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0205417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.226343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAGAC AGCACCGTTC GCCTGTTGAA CAGATTTCTC CAGAGGACTG GGAGAATACG
CCAGCAAGTG TCAAGCGACT GGTAGACGTC CTTCTAAGCA GTTCTACTGC AGCAGGGCAG
GAAAGCCATT TGATTCAATT TTTGGATGCC ACCCCCATTG GGATTGCTGT CCATGATGCC
ACCGGCCAAC TGACTTATAT CAACCAGGCA GGTCAGACTA TCCTAAGCAT CGATCGCGCC
TATCAAGTGA GTACTGACCA ACTCTCAGAA GTCTTCCAGG TTTACCGTCA GGGGACTCAA
AAACTTTACC CGGCTGAATC ATTACCCAGT ACGCTAGCTC TGGCAGGACA AGTAGTGGGA
GTTGATGATC TAGAACTGCA TCGTCGTGGT CAGGTTATTC CTCTGGAGGT GTGGGCAAGT
CCGATTTTTG ATGCTCAGGG GGAGGTAACG CATACAATTG CGACATTCCA GGATATTAGT
GCAAGAAGGC AACTTGAAAC TGAAAGAAAA CGATATGAGC AGGAACAGTT ACAGCGGGAA
CAGTCCCTCA ATCGAGTCTT CCAGTCCATT CGGAATTCTC TAGACTTAAA TACTATTTTT
ACTACTGCAA CTGAAGAGAC AGCTCAACTT TTAAAACCGC TGAATTGCTT TGTTGTGCAA
TATCTACCAG AGCAAGGTAT TTGGCAGCAC GTTGCAGAGT TTAACCATGA GCCGGGTTCC
GCAAGCACAA TTGGGCTTGA AATTCCTGAC GCAGATAATC CCTTTGCTGC CCAACTTAAG
CAGTTGCAGA CTGTACGGGT AGAGGATACT AGCCAGGTGG ATGACAAAAT CAATCGGGAA
CTTGCCCGTG ATACCCCTGG AGCCTGGTTG CTGATTCCTC TTGTAATTGA AGGTCAACTA
TGGGGCAGTT TTACAGTAAC AGCAGTCCAA CGGCCTTTTA CCTGGAACCA TAATCAGGTT
CAGCTAGCCC AGGCTGTTGC GGCCCAACTA GAAGTTGCGA TTCACCAGGC TAACCTTTAT
CAACAGTTGC AGATGGAGTT AGCCGAACGC TGCCAGGCAG AAGCAGCTTT GCGAGAAAGC
GAGTCCCGGT TTCAGAATAT TGCAGCAAAT ATCCCAGGTA TCATCTACGG TTACCGCTTT
TGCGCGGATG GGTCTGATCA GTTTACCTAC ATCAGCTCTG GGTTCTGTGA GGTGTATGGG
TTTGAACCGG ATGAAGCCTT ACAGGACAGC AGTATTATCT GGCAGATGAC CCACCCTGAT
GATTTAGAGC GATTAAAGCA ATCTGTTATA GAGTCCTACC AAACCCTACA AAGGTGGCGA
TGCCAGTATC GTGTGATGAC CCCGGCTGGA CAACTGAAAT GGCTGGAGGG AGTTTCGCGC
CCCACCCGGC AACCGAACGG CGATGTGATT TGGGATGGGT TGATCATTGA CATTAGCGAT
CGTAAGCAAG TCGAAGTCGC TCTACAAGAA AGTGAAGCGC GCTATCGCTT GTTAGCTGAG
AATATGAACG ACCTTGTCTG TCTGCATGAT TTAGAGGGTC ACTATTTATA TGTCAGCCCG
TCCTGTGAAA CTCTTCTGGG CTATCGTCAA GATGAAATGC TGGGGCAGGT TCCTTTCAAC
TTCTTTCATC CTGACGATCA AGGTCGAATC TATCAAGAGG CTTTTATACC GGCATTAAGT
GGTGAACCTC GGCCGATCAC TTACCGGATG CGTCAAAAAT CTGGCAACTA CATCTGGTTC
GAAACCCTAA CAAAACCTAT TTTCGGACAA ACAGGGCAAA TCGTTCAGCT TCAAACCACG
TCTCGGGATG TAACGGAGCG GATTCAGGTA CAGGAACAGT TAAAATATGA TGCCCTTCAC
GACGCCCTCA CAGGGCTACC TAATCGTTTG CTACTGATGG AACGGTTGGA ATTAGCAATT
CATCGAGCCC AGCGGTTGCC TGGCTATCAC TTTGCAGTTT TGTTTCTTGA CCTGGATCGC
TTCAAAATTA TCAATGACAG CCTGGGACAT TTAGCAGGAG ATCAGTTATT GACTGCTGTT
GCTGAAAAAT TATGCTCCAC GCTGAGGGAC ATTGATCTTG TTGCCCGTTT GGGTGGGGAC
GAGTTCGTCA TTTTACTTGA GGAAGTGAAG GACATTCAGG AAATTATTAA ATTTGTAGAT
GAAATTTTTG CCGGATTACA AATCCCGATC TTGATTGCAG GGTGTGAAGT TTATATAACG
GCTAGTATTG GTATTGTTTT CAGCGACGAC AAGCCTGCCC AGGCTTCACA TCTACTACGG
AATGCTGATA TTGCCATGTA TCGAGCCAAG GCTAAAGGCA AAGACCGATA TGAAATCTTC
AATATGGAGA TGCATGCACA GGCATTGAAT CGACTGCATT TAGAAAATGA TCTCCGCCGA
GCGGTTGAAC GGCAAGAACT GATCCTCCAC TACCAACCAA TTCTGGCTTT AGATACTGGA
CACATTGTTG GTTTTGAGAC CTTAGTTCGC TGGAAGCATC CAATTCAGGG ATTGAAATTT
CCGGCTGATT TTATTGCTAT GGCTGAAGAA ACAGGGCTGA TCACCCATAT TGATATCTGG
GCAATCAGTA TGGCCTGCCA TCAGCTAGCT AAATGGCAAG CTGCTTTTCC TGGCACTAAA
ATGAAAGTGA GTGTCAATCT TTCAGCTCAC GATTTGCGTC GCTCTAATTT ACTAGAAGAC
ATTGATAATG TTCTGGCTCA AGCCAACATT GATGGGTGTT GCTTATGCTT AGAGATTACT
GAAAGTATGC TGATTGAAGA TATTGAGTCA ACCATCAAAT TGCTTAATCA ATTAAAAGAA
AGAGGAGTCC AAATTCTAAT TGACGATTTT GGCACCGGGT ATTCATCGCT TAGTTATCTC
CATCGCTTAC CTGTAGATAG CCTCAAAGTC GATCGTTCCT TTGTGAATCA AATTCAAGTT
GATAATAGAA ATGCCAAAAT TGTTGAAACG ATCGCATCGC TATCTGTCTC CCTAGGCTTG
GATGCGATCG CTGAAGGCAT TGAAACCCCA AAACAGCTAA AAAGGCTACA AAAGCTTGGC
TATAAGTTTG GCCAGGGCTA TCTTTTCTCA CAGCCTTTAA CTCATAAGGA AGTAGAGATC
CTGCTGGGCA GCCAATACTG CTATAATCTA CGCTAA
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| Protein sequence | MERQHRSPVE QISPEDWENT PASVKRLVDV LLSSSTAAGQ ESHLIQFLDA TPIGIAVHDA
TGQLTYINQA GQTILSIDRA YQVSTDQLSE VFQVYRQGTQ KLYPAESLPS TLALAGQVVG
VDDLELHRRG QVIPLEVWAS PIFDAQGEVT HTIATFQDIS ARRQLETERK RYEQEQLQRE
QSLNRVFQSI RNSLDLNTIF TTATEETAQL LKPLNCFVVQ YLPEQGIWQH VAEFNHEPGS
ASTIGLEIPD ADNPFAAQLK QLQTVRVEDT SQVDDKINRE LARDTPGAWL LIPLVIEGQL
WGSFTVTAVQ RPFTWNHNQV QLAQAVAAQL EVAIHQANLY QQLQMELAER CQAEAALRES
ESRFQNIAAN IPGIIYGYRF CADGSDQFTY ISSGFCEVYG FEPDEALQDS SIIWQMTHPD
DLERLKQSVI ESYQTLQRWR CQYRVMTPAG QLKWLEGVSR PTRQPNGDVI WDGLIIDISD
RKQVEVALQE SEARYRLLAE NMNDLVCLHD LEGHYLYVSP SCETLLGYRQ DEMLGQVPFN
FFHPDDQGRI YQEAFIPALS GEPRPITYRM RQKSGNYIWF ETLTKPIFGQ TGQIVQLQTT
SRDVTERIQV QEQLKYDALH DALTGLPNRL LLMERLELAI HRAQRLPGYH FAVLFLDLDR
FKIINDSLGH LAGDQLLTAV AEKLCSTLRD IDLVARLGGD EFVILLEEVK DIQEIIKFVD
EIFAGLQIPI LIAGCEVYIT ASIGIVFSDD KPAQASHLLR NADIAMYRAK AKGKDRYEIF
NMEMHAQALN RLHLENDLRR AVERQELILH YQPILALDTG HIVGFETLVR WKHPIQGLKF
PADFIAMAEE TGLITHIDIW AISMACHQLA KWQAAFPGTK MKVSVNLSAH DLRRSNLLED
IDNVLAQANI DGCCLCLEIT ESMLIEDIES TIKLLNQLKE RGVQILIDDF GTGYSSLSYL
HRLPVDSLKV DRSFVNQIQV DNRNAKIVET IASLSVSLGL DAIAEGIETP KQLKRLQKLG
YKFGQGYLFS QPLTHKEVEI LLGSQYCYNL R
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