Gene Cyan7425_2533 details

Gene Information

• Locus tag: Cyan7425_2533
• Symbol: def
• ID: 7288464
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 7425
• Kingdom: Bacteria
• Replicon accession: NC_011884
• Strand: +
• Start bp: 2492132
• End bp: 2492698
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 643585528
• Product: peptide deformylase
• Protein accession: YP_002483251
• Protein GI: 220907940
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 26
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCCCAG CGGTTTTAGT TGAAAAGCGT AAGTTAAAAG AACCCCCGTT GACAATCCAC 
TATCTGGGCG ATCGGGTGCT GCGCCAACCC TGCAAGCGGA TCAGCCAGGT GAACAACGAA 
ACCCGGGAAC TGGCCCGAAC CATGCTGCAA ACCATGTACA GTGCGGATGG AATTGGTCTG 
GCTGCCCCCC AGGTGGGTGT GAATAAACAG TTGATCGTCG TAGATATTCA TCCCGATGAA 
GCCGCTAACC CTCCCCTGAT TCTGGTCAAC CCCGTGATCC GTGAGTTCAG TCCAGAGGTG 
AGCCTGGGCC AGGAAGGCTG TCTCAGTATC CCTGGAGTCT ACCTGGATGT GAAACGCCCG 
GAGATGATCG AAGTTGCTTA TAAAGACGAG CAGGGCCGTC CCCAGGTCTT ATATGCCAGT 
GGCCTGCTCA GTCGGGCGAT TCAGCACGAA ATTGACCACC TTGGCGGCGT GATGTTCGTT 
GATCGGGTGG AAAACATGCT GCTCTTGAAT CAGGAATTAA AAGAACACGG ATTCTCTCGC 
CAGGCCGTCA AACCGATCGC GTCTTGA 

 

Protein sequence

MAPAVLVEKR KLKEPPLTIH YLGDRVLRQP CKRISQVNNE TRELARTMLQ TMYSADGIGL 
AAPQVGVNKQ LIVVDIHPDE AANPPLILVN PVIREFSPEV SLGQEGCLSI PGVYLDVKRP 
EMIEVAYKDE QGRPQVLYAS GLLSRAIQHE IDHLGGVMFV DRVENMLLLN QELKEHGFSR 
QAVKPIAS