Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_1923 |
Symbol | |
ID | 7287848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | - |
Start bp | 1807024 |
End bp | 1808607 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643584920 |
Product | S-layer domain protein |
Protein accession | YP_002482649 |
Protein GI | 220907338 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0684445 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAGCT CCCCCCCAGA CCTTCGGGCG ATCGCTGCAG GTTTCAGCTT GTCTTGTCTA TGCTTCAGCC CTTCCCCTCC CTCCCTGGCC GAGTCTACCG TTGATCCTGC CCTGCAGCCC ATCACAGCGG TAAACCAACT GATGGATGTA CAACCGACGG ACTGGGCCTA TCAGGCAGTG CAGTCCCTGG CCGAGCGGTA TGAATGTCTG GCGGGTTATT CCGGGGGTAG CTGGGGGGGC GAAGGGGCCC TGACCCGCTA TACATTTGCG GCAGGGTTAA AGGTCTGTCT TGAGCAGATT GAGCAAAGGT ATAGGTTTGC AACGACGGAT CTGGTCCAGC CAGATTTGCC AACTCTCCAG GCCCTTCAGA ATGAATTTAG TCCCGAATTG CAACAATTGG CTGACCAAGG GGCTGGTCTG GAGCGGCGGG CCGCCAGCCT GGAAGCACGA CAATTTTCCA CCACCACCAA ACTGACGGGT CAACTGATTT TTGCAACCAA TGCAGGTGGC TTTACAGGCA ACACCATCCT GGACCCAAAG GGGGAAGCGA TCGCCCAAGC TGATCCCAAC CCGACTTCCC TCTATCGCAT TGCCCTGGAT TTGAATACGA GCTTTACCGG CCCAGACTTA CTCAGAGTGC GGCTGGTGGC GGCCAGTGGG GGAACAAATG ACAATGCCGC TGGCATTCTG GAACCCTTTT TTGGCAGTGG GTTGGACTTT TCCGCTAAAC CCCCCAGTTT TGGTACTGTT GAAATCACCC GCCTGCATTA CAGCTTCAAA CCCCTGCCCG ATCTGACAGT GACGATCGCC CCTGAGATGC GGGTGACCGA TTTTGTCGAT CTCAACCGCT ATGCCAACCT GGGATTTCGT GACTTCAGCA CTGAAGCCCT GGTCAATAAT TACATTCTCT TTCCCCTGAG TGGCCCCACC ACAGGTGCCG TTGTCATCTG GAATCCCGGC AGACGGGCGG CCGTAACCCT CCGGGCGGTG TATGCCGCTG CTGATGCTGC CAACCCCAGG GATCAAGGTT TACTTAGAGG AACGGCCCCC TTTGTCCGGT TGCTCTATCC GCCCCCAGGG AATCCATTCA CCGTGGATTT AGGCGATCGG GGACTGTTTG GAGATACCTT TCAGGGCCTG GTTGAAGTGG AGTATGCTCC TGCTCGTAGA TTCACCTTAC GCCTGCAATA CAGTGGTGGA AGGTTGTTTA ATCAGCGCTT TGATGGGATT GGGGTCAATG CTGAACTCGC GATCGCTGAA AAGATTGGAC TGGTAGGGCG CTATGGCTAC AGTCACTATG AAAACACGCA ATTTGGTAAC CTCACCCCTA ACTATTGGAT GGCAGGTTTA GTGGTGCGCG ACATCTGGCT ACCCGGTTCC TTAGCGGGGG TGGGGGTGAG CCAGCCCTTT ATTACCCCTC AGATCGGCAA TGCCACCCAA ACCAATATTG AAGCGTTTTA CAACATACCG CTCAGTCAGG GGATTCAGAT CGCTCCTGTA GTGCAAGTGA TTACATCCCC AGGGAATCAG TCTGCCAACG GAACCATTTT TACCGGCACC CTTCGCACCG TCTTTTATTT TTAG
|
Protein sequence | MNSSPPDLRA IAAGFSLSCL CFSPSPPSLA ESTVDPALQP ITAVNQLMDV QPTDWAYQAV QSLAERYECL AGYSGGSWGG EGALTRYTFA AGLKVCLEQI EQRYRFATTD LVQPDLPTLQ ALQNEFSPEL QQLADQGAGL ERRAASLEAR QFSTTTKLTG QLIFATNAGG FTGNTILDPK GEAIAQADPN PTSLYRIALD LNTSFTGPDL LRVRLVAASG GTNDNAAGIL EPFFGSGLDF SAKPPSFGTV EITRLHYSFK PLPDLTVTIA PEMRVTDFVD LNRYANLGFR DFSTEALVNN YILFPLSGPT TGAVVIWNPG RRAAVTLRAV YAAADAANPR DQGLLRGTAP FVRLLYPPPG NPFTVDLGDR GLFGDTFQGL VEVEYAPARR FTLRLQYSGG RLFNQRFDGI GVNAELAIAE KIGLVGRYGY SHYENTQFGN LTPNYWMAGL VVRDIWLPGS LAGVGVSQPF ITPQIGNATQ TNIEAFYNIP LSQGIQIAPV VQVITSPGNQ SANGTIFTGT LRTVFYF
|
| |