Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_1889 |
Symbol | |
ID | 7287814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | - |
Start bp | 1775724 |
End bp | 1776518 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643584888 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002482617 |
Protein GI | 220907306 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0188274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACTG CTTTGATTAC CGGAGCTTCG GTGGGGATTG GGGCTGCCTT TGCACAGGAA CTGGCGGCTC GACAGATGAA TCTGGTATTA GTTTCCCGTG CGGAAGAAAA ATTAAAATCC CTGGCCACCC ATTTAGAAGA ACGCTATAAA ATTCAAGCCC AGGTGATTGT CCAGGATTTG ACCCTGGCAG AGGCTCCCCT CCAGGTCTAT AATGCAGTGG AGCAGCGAGG TTTGACGATT GATCTATTGA TCAACAATGC TGGTTTTGGC GATTACGGCA ATTTTGCCCA GCGCTCCTTC GATCGTCAGG CTGAAATGGT CAAACTGAAT GTGCTAGCCC TGGTTGAAAT GACCCACCTC TTCTTAGCAC CCATGCAACA AAAGGGAGCG GGGGAGATTA TTAATCTCAG TTCAATCTCG GCATTTCAAC CCATTCCCTA CCTGGCCGTT TATTCAGCTT CGAAAGCCTT TGTTCTCCAT TTTAGTGAAG CGTTATGGGC AGAGAATCGC GCTAAGGGGG TTAAGATTTT AGCGGTCTGT CCCGGTCCAG TTCAAACAGA ATTCTTTGCG GCTGCGGACA TGGAACGCAA TGTCCAGTTA ATGCAAAGTC AAACCTATGA AGACCCGCAA TCAGTGGTCC AGAAGGCTCT CAAAGCTTTA GCGGCAGGAC AACCCAGTCT GGTAACTGGC CCCTGGCAAA ATCATGTCAT TGCCAACGCT TCCCGCTTCA CGTCCCGTGA ATTTGTCCTC AACATGCTGG AACCCCGCTT TAGGCCCAGC GATTCCGTCG ATTAA
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Protein sequence | MPTALITGAS VGIGAAFAQE LAARQMNLVL VSRAEEKLKS LATHLEERYK IQAQVIVQDL TLAEAPLQVY NAVEQRGLTI DLLINNAGFG DYGNFAQRSF DRQAEMVKLN VLALVEMTHL FLAPMQQKGA GEIINLSSIS AFQPIPYLAV YSASKAFVLH FSEALWAENR AKGVKILAVC PGPVQTEFFA AADMERNVQL MQSQTYEDPQ SVVQKALKAL AAGQPSLVTG PWQNHVIANA SRFTSREFVL NMLEPRFRPS DSVD
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