| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_1788 |
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| Symbol | |
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| ID | 7287712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011884 |
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| Strand | + |
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| Start bp | 1638973 |
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| End bp | 1640340 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643584786 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_002482516 |
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| Protein GI | 220907205 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.847972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCTCT ATTTAACCCT GCATATGGTG GGCACAATGT CAGCGATTCC CTACTACGAC
GCGATGGATG ACGATGAACG GTCCGGTGCA GAATCCCGGC ATTCCGGCCC TCGCTCTGAG
GATGACTCGG TCTTGGAGGA GGATAGCCTG GAGACCCTCG CTGAGCCTGG AGAACTTGAC
CTGCTGGTTG AGGCCAATGG GTTAGAGGCT AATGGGGATG GCAGCCTGTT GGAGGATTGG
CCTGAGGAAG ACGTTGAAGA AGCGGTGCAG TTGGCGGGAC GGGGACAGCG AACCACAGAC
CTGGTCAGGC TATATTTGCA GGAAATTGGG CGGGTCCGAT TACTGGGGCG GGATGAAGAA
GTTTCGGAGG CGCAGAAAGT TCAGCGTTAT ATGCGTCTGG TGGAACTCCG GGATCAGGTG
CAGGCGGATC ATCAGCCCAT TCAGCAGTAC GTCCACTTAA TTGATATCCA CGATCGGCTG
GCGGCCCAAT TGGGTCATCG TCCCCCCCTG GAACGCTGGG CCAGAGAAGC GGGGGTAGTG
GCGGGGCAAC TGAAGACTTT GCTGGCGGAG GGAAAACAGG CCTGGGCCAC GGCGATCGGG
ATGATGGTCG GAGAGTTGGA TCAGATCCAG AAGGAAGGAG TGCGGGCCAA GGAACACATG
ATTCAGGCCA ATCTCCGCCT GGTCGTCTCT GTCGCCAAAA AATATCAGAA CCGGGGATTG
GAATTACTGG ATTTAATTCA GGAGGGAACC CTGGGGCTGG AACGGGCGGT GGAAAAGTTC
GACCCGACGA AAGGGTATCG GTTCAGCACC TATGCTTACT GGTGGATTCG GCAGGGGATC
ACGCGGGCCA TTGCCACTCA GAGTCGCACC ATTCGCCTCC CCGTTCACAT TACGGAAAAG
CTGAATAAAA TTAAGAAAGC TCAACGAAAA ATTTCCCAGG AAAAAGGCCA CACTCCTTCG
ATCGAAGATA TTGCCACTGA ATTAGAAATG ACGGTGCCCC AGGTGCGGGA ATTGCTGGTG
CGGGTACCCC GATCGGTCTC TTTAGAAACC AAAGTGGGCA AGGACAAAGA CACAGAATTG
GGGGATCTCC TGGAAACGGA TGATCTTTCC CCAGAAGAAA TGATGATGCG GGAGTCCCTG
CACCGGGAAT TAGAAAAGTT ACTGGCGGAC CTGACCAGTC GGGAGCGCGA TGTGATCAGT
ATGCGCTTTG GCCTGGGGGA TGGCCATGCC TATTCGCTGG CTGATATTGG TCGAGCCCTG
GATCTTTCGC GGGAGCGTGT ACGCCAAATT GAAGCCAAGG CTTTACAAAA GCTCCGACAA
CCAAAACGGC GCAATCGGGT TCGAGATTAC CTGGATTCTC TGGCTTAG
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| Protein sequence | MHLYLTLHMV GTMSAIPYYD AMDDDERSGA ESRHSGPRSE DDSVLEEDSL ETLAEPGELD
LLVEANGLEA NGDGSLLEDW PEEDVEEAVQ LAGRGQRTTD LVRLYLQEIG RVRLLGRDEE
VSEAQKVQRY MRLVELRDQV QADHQPIQQY VHLIDIHDRL AAQLGHRPPL ERWAREAGVV
AGQLKTLLAE GKQAWATAIG MMVGELDQIQ KEGVRAKEHM IQANLRLVVS VAKKYQNRGL
ELLDLIQEGT LGLERAVEKF DPTKGYRFST YAYWWIRQGI TRAIATQSRT IRLPVHITEK
LNKIKKAQRK ISQEKGHTPS IEDIATELEM TVPQVRELLV RVPRSVSLET KVGKDKDTEL
GDLLETDDLS PEEMMMRESL HRELEKLLAD LTSRERDVIS MRFGLGDGHA YSLADIGRAL
DLSRERVRQI EAKALQKLRQ PKRRNRVRDY LDSLA
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