| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_1756 |
|---|
| Symbol | |
|---|
| ID | 7287680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 1599365 |
|---|
| End bp | 1602586 |
|---|
| Gene Length | 3222 bp |
|---|
| Protein Length | 1073 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643584756 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_002482486 |
|---|
| Protein GI | 220907175 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis
[COG3063] Tfp pilus assembly protein PilF |
|---|
| TIGRFAM ID | [TIGR03032] conserved hypothetical protein TIGR03032 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.784743 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCAA TCCATTTTCA GGAGCAGCCG CTTCGCACAG TTCACAGCAA GAATTTTCCA
GGAATTCTCT CTGAGTTAGG TATTTCTTTG AGCGTTTCCA CTTATCAGGC TAGTCGTTTG
CTTCTTCTCA AAGGGGGTAG CAACACTCTC AAAATGGATT CATACTTATT TGATCAACCT
ATGGGTGTGG CGACGGATGG TAAGCGACTG GCGATCGGCG GTAGCACTCA AATCTGGCAA
TTAGGGATTG CACCGGGCAC CTCTAGTCAA CTGGCTCCTC CTGGCAGCTA TGATGCCTGC
TTTTTACCTC GGCAAACCCA TGTGACGGGA GATATCGACA TTCACGAAAT GGCTTATGCC
GACGATGAAC TCTGGTTTAT CAATACCCGT TTGTCCTGTC TTTGTACCCT TGATCCTGCT
TATAGTTTCG TGCCTCGCTG GCGACCGCCT TTTGTAACTG CTTATGATTT TAGCGATCGC
TGTCATCTGA ATGGGTTGGG GCTGCGTGAG GGACAACCCC GCTATGTGAC TGCTTTGGGA
GCCAGTGATA ATCGGGAAGG ATGGCGCTCG AATAAGGCCA GAGGCGGAAT CTTGATGGAT
ATCCAGAGTA ATCAGATCCT CTGTGAGGGT TTGTCCATGC CCCATTCCCC CCGCTGGTAC
AACAGCAACC TCTGGGTGTT AGAGTCTGGC AATGGCAGTC TGGCCAAAGT GGACCTCAGT
ACAGGTACCT GGGAAACGAT CGTCCAACTG CCTGGTTTCG CTCGGGGTTT AGATTTCTGC
GGTTCTCTCG CATTCATTGG TCTGTCTCAG GTGCGAGGAT CGGCTTTTTT CAGCGGCATT
CCGATCACCC AGCGCTGCCA GGAACGCATC TGTGGGGTTT GGATTGTAAA CATTGAGAAT
GGAGAAGAAG TTGCCTTTCT CAAGTTCGAG GAGGCGATTC ACGAGATTTT TGCGGTGACC
GTTCTGCCTG GAATCCGCTG TCCTGAGATC ATCGCCTGGG ATGACGATCA GTTGCGGACG
GCTTTTGTCC TGCCTGATGC TGCCCTGAAA GAGATGGTCT TCCCAGACCC AGACCCTGTG
GTGGATTCCT TTGCTGTAGT GGTTCCCGTC TGCAATATTG AAACCAAAGG GATTTCTGCT
TGTTGGCACA CCCTCAATAG TATTCAGGCT AGTCTGAACT ACTTCCAACA ACACTATCCC
AAAGCAGCGA AAACGAAATT TGAGGTTTTA CTGGTTGACG ATGGCTCTAC GGATCAGACA
GTCACCCTTC TCAAGGATTA CATCCACGAC AAGCCCCATT TCAAGTTAGT GCAGCACGAT
CGCCCACGAG GACTAGCTGC GGCCCGAAAT ACGGGAGCCA AGGCTTGCCA GGGTAAGGCA
ATTTTTTTCT GCAATCCTGA TGATCATTGT CGCCCCGATC ATATTTTTAC TGCACTCAAG
CATCTGAATA CACCTCTGGA GACCTCAGTT CAACCACAAG ACTCCCCTCC GCCCAAGCCC
AAAGGACTCC AACTGCCCCT ACGACGCCCC CGCCGACGGC TTTACACATT ACCAGGAAAT
TATCCTGCTG CAGTGAAGAC CGGGATTTTT CTGCAGGAGC CTATCGATCC CCACTGGAAG
CAGTCGCTTC AGGAAGGTTT ATGCCTGAAC CTGTGTGTGC GGCGAGAAGT CCATGAATTT
ATCGAAGGCT TTCCAGAGCA GGAGGTCTTG CAAACATCGC TCAATGGCAT GGAGGAGAGC
GCCTATAATG GCTGGCTAAA AGAGCTATTT GCAGTTGTCT GGGAACCCAA CGAAACCATA
GAGCTTAATC CTTATTCAGA TTATTATTGC GATCAGCAAT TCGCGAAGTT TCAGTCTCCT
CCCAAAACAG ATCAGGGCCA TTCACCTGAG CAGCAGCACT ACCTGGACCA GATCAAAAAA
ATTATTGAAG AGCACAACAG CTACTTGCAA GCTAAACTCC AGGTTGAGTC TGAGGTGGAA
CGTCTCCTGC GGTTAGCTGA GCAGGCTTAC CAACAGGGTC AACTTGACCA AAGCACTGAG
CTATATCGCC AATGTCTGGC ACTGCACTCC CGTTGCGCTG AGGCTCACTA CAAACTGGGT
GTGATCTACA TGGAACAAAA CCAAACGGGA GCTGCGATCG TCGAGTTTGA ACAGGTTCTG
AGGGAACAGC TTTTCAACAG CGAGGCTTAC CATCAGTTAG GGTTGATCTA CCAGTTGCAA
AACCAAACTG AGACAGCCAT TGCTTATTAT CTTCAGTCCC TCAACCTTCG CCCCGATCAA
GCCAAAGTTC GTTTGAATCT GGCCCAGGCT TACCTGCAAA AGGGTGACTT GGCTCTCGGT
TTTGTCGAGT ACGAGTGGCG AACCCAGATG GCTGAAGTTT CCCAATTTGA TTGTCCTCAT
CCCCGCTGGA ATGGAGAAGC ACAGTTGGAT CAGACCATTC TGATCTATGC CGAACAGGGG
CTGGAGGATG CGATCCAGTT TGTGCGTTTG ATTCCTCTGG TCCGGCAACG ATGTCAGCGG
GTGATTTTAG TCTGTCCTCC AGAGCTGACT GATTTGTTCA GAACTGCCGT TGGCGTGGAT
GAAGTGCGGA CCCCTAATGA TATTCCTTTA GAAGCCTTTC AGACCTATGT TTCATTAAGC
AGTTTGCCGC TGTTGCTAGG AATAACTCTG GAGAATCTGC CCCAGTCTGT TCCCTACCTT
AATGTTCCTG CATCGTCAAA GTTGCAGCTC AGCTTACCAA AGGCTGAAGG AAAGTTGCGG
GTTGGGATTT GCTGGACCAA TGAGCCTATA TCCTCGGATA ATGGGCGTTA CTCCTGCCGC
CTGAGCGATT TTCGTCCGGT CTTAAAAACC CCTGGTATTG ATTTTTATAG TTTGCGAAAG
GTTGTTAGTC CAGTGGAACA GGATCAACTG GATTTTTGGC AGGTTACCGA TCTGAGTAAA
CAACTTCCGA CCTTTGCTGA AACTGCAGCA GCGATCGCTC AGTTAGATCT AATCATTACC
GTTGACACAG TGGTGGCACA CTTGGCAGGG GCGCTGGGAA AACCCGTCTG GACGTTACTC
TGTTATTCAC CAGACTGGTG CTGGATGTTG AAACGTACGG ATTCTCCCTG GTATCCGACC
ATGCGCTTAT TCCGGCAGAC CGTTCCCGGT GAATGGACAG AGGTATTCAT GCAGGTGCAG
CAGGCATTGG ATCAACTCAA GAGCTCTGAA TTTTCGAGCT GA
|
|---|
| Protein sequence | MNPIHFQEQP LRTVHSKNFP GILSELGISL SVSTYQASRL LLLKGGSNTL KMDSYLFDQP
MGVATDGKRL AIGGSTQIWQ LGIAPGTSSQ LAPPGSYDAC FLPRQTHVTG DIDIHEMAYA
DDELWFINTR LSCLCTLDPA YSFVPRWRPP FVTAYDFSDR CHLNGLGLRE GQPRYVTALG
ASDNREGWRS NKARGGILMD IQSNQILCEG LSMPHSPRWY NSNLWVLESG NGSLAKVDLS
TGTWETIVQL PGFARGLDFC GSLAFIGLSQ VRGSAFFSGI PITQRCQERI CGVWIVNIEN
GEEVAFLKFE EAIHEIFAVT VLPGIRCPEI IAWDDDQLRT AFVLPDAALK EMVFPDPDPV
VDSFAVVVPV CNIETKGISA CWHTLNSIQA SLNYFQQHYP KAAKTKFEVL LVDDGSTDQT
VTLLKDYIHD KPHFKLVQHD RPRGLAAARN TGAKACQGKA IFFCNPDDHC RPDHIFTALK
HLNTPLETSV QPQDSPPPKP KGLQLPLRRP RRRLYTLPGN YPAAVKTGIF LQEPIDPHWK
QSLQEGLCLN LCVRREVHEF IEGFPEQEVL QTSLNGMEES AYNGWLKELF AVVWEPNETI
ELNPYSDYYC DQQFAKFQSP PKTDQGHSPE QQHYLDQIKK IIEEHNSYLQ AKLQVESEVE
RLLRLAEQAY QQGQLDQSTE LYRQCLALHS RCAEAHYKLG VIYMEQNQTG AAIVEFEQVL
REQLFNSEAY HQLGLIYQLQ NQTETAIAYY LQSLNLRPDQ AKVRLNLAQA YLQKGDLALG
FVEYEWRTQM AEVSQFDCPH PRWNGEAQLD QTILIYAEQG LEDAIQFVRL IPLVRQRCQR
VILVCPPELT DLFRTAVGVD EVRTPNDIPL EAFQTYVSLS SLPLLLGITL ENLPQSVPYL
NVPASSKLQL SLPKAEGKLR VGICWTNEPI SSDNGRYSCR LSDFRPVLKT PGIDFYSLRK
VVSPVEQDQL DFWQVTDLSK QLPTFAETAA AIAQLDLIIT VDTVVAHLAG ALGKPVWTLL
CYSPDWCWML KRTDSPWYPT MRLFRQTVPG EWTEVFMQVQ QALDQLKSSE FSS
|
|---|
| |