| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_1569 |
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| Symbol | sdhA |
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| ID | 7287492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011884 |
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| Strand | + |
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| Start bp | 1413831 |
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| End bp | 1415558 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643584569 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_002482300 |
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| Protein GI | 220906989 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.272912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000112727 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGGAAC ACGATGTGGT TATTGTTGGA GGGGGATTGG CGGGATGCCG GGCCGCTCTG
GAGATTTGTC GTCTGGCTCC CAACCTGAAC CTGGCGCTGG TGGCCAAAAC CCATCCAATT
CGCTCCCACT CGGTTGCTGC CCAGGGGGGA ATGGCGGCCA CCTTAAAAAA TGTGGATGAG
AGCGATTCCT GGGAAAGCCA TGCGTTTGAT ACCGTGAAGG GCTCGGATTA TCTGGCCGAT
CAGGATGCCG TCGAAATTCT GGCCAAGGAA GCTCCAGAGG TGGTGATCGA TCTGGAACAT
CTGGGGGTTT TGTTTTCGCG GCTGCCGGAT GGTCGCATTG CCCAGCGCGC CTTTGGAGGG
CATACCCACA ACCGCACCTG TTATGCCGCC GACAAAACAG GTCATGCCAT CCTGCACGAA
CTTTATAGCA ATTTGCTCAA GTATGGGGTG CAGTTCTACG AAGAATGGTA CGTGATGCGC
CTGATCCTGG AAGATAACCA GGCCAAGGGA GTTGTGATGT ATCACCTGCT GGATGGCGAA
ATTCAGGTGG TGCGGGCTAA AGCGGTCATG TTTGCCACGG GGGGCTACGG GCGGGTCTAC
AATACCACCT CGAATGATTT TGCTTCCACA GGGGATGGGC TGGCGATGAC GGCACTGGCG
GGTTTACCCC TGGAGGATAT GGAATTTGTT CAGTTTCACC CCACGGGCCT GTATCCAGCC
GGGGTGTTAA TTTCAGAAGC GGTGCGGGGA GAAGGAGCTT ATTTGATTAA TGTCACGGGC
GATCGGTTTA TGGCTACCTA TGCGCCCAGT CGGATGGAAC TTGCTCCCAG AGATATTACC
TCACGGGCGA TCGCCTTGGA AATTCGGGCC GGACGGGGGT GCAATCTGGA TGGCAGTGCG
GGCGGACCCT TTGTCTATCT CGATCTGCGG CACATGGGCA AGGAAAAAAT TATGAGTCGG
GTGCCCTTCT GTTGGGAAGA AGCCCATCGC CTGGCTGGGG TGGATGCGGT GACTGAACCG
ATTCCGGTGC GGCCAACAGT GCATTATTCC ATGGGGGGAA TTCCGGTCAA CACCGACGGT
CAGGTGCGTA ATAGTGGGGA CGGATTGGTG CAGGGTTTCT TTGCCGCTGG GGAAACCGCC
TGTGTGTCAG TGCATGGGGC TAATCGCCTG GGTAGTAACT CCCTGCTTGA ATGTGTGGTG
TATGGGCGAC GGACGGGGGC AGCGATCGCC AGGGCCGTTC AGAATCAGAA ATTACCTGAC
CTGGATGAAC AGCGGTATTT ACGAGAAGCC GCAGAACAAA TTCAAGCCTT GCTCGACCAG
GGGAGAGACT ATCGCATTGC CCAGATTCGG CAGCAGTTTC AAGATTGCCT GACCGAATAT
TGTGGCGTGT TTCGCACCGC AGAGCAAATG CAGGCGGGCT TGGAGCAACT GCGTCAACTG
CAGCAAAAGT ATCCAAAAGT TTATCTGGAT GACAAAGAAA AACTTTGGAA CACTGAAATT
ATCGAAGCCC TGGAACTACG CAATTTGATG GTGGTGGGGG AGATGATCAT TACCTCAGCC
CTACAGCGGC AGGAAAGCCG GGGTGCCCAT GCCAGAGAAG ACTATCCCCA ACGGGATGAT
GCTAACTTCC TTAAACATAC CCTGGCCTAC TATTCCGCTG CTGGTGTGGA TGTCCAGTAT
ATGCCTGTGG CGATCACGTT GTTCCAACCC CAGGAGCGCA AATATTAG
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| Protein sequence | MLEHDVVIVG GGLAGCRAAL EICRLAPNLN LALVAKTHPI RSHSVAAQGG MAATLKNVDE
SDSWESHAFD TVKGSDYLAD QDAVEILAKE APEVVIDLEH LGVLFSRLPD GRIAQRAFGG
HTHNRTCYAA DKTGHAILHE LYSNLLKYGV QFYEEWYVMR LILEDNQAKG VVMYHLLDGE
IQVVRAKAVM FATGGYGRVY NTTSNDFAST GDGLAMTALA GLPLEDMEFV QFHPTGLYPA
GVLISEAVRG EGAYLINVTG DRFMATYAPS RMELAPRDIT SRAIALEIRA GRGCNLDGSA
GGPFVYLDLR HMGKEKIMSR VPFCWEEAHR LAGVDAVTEP IPVRPTVHYS MGGIPVNTDG
QVRNSGDGLV QGFFAAGETA CVSVHGANRL GSNSLLECVV YGRRTGAAIA RAVQNQKLPD
LDEQRYLREA AEQIQALLDQ GRDYRIAQIR QQFQDCLTEY CGVFRTAEQM QAGLEQLRQL
QQKYPKVYLD DKEKLWNTEI IEALELRNLM VVGEMIITSA LQRQESRGAH AREDYPQRDD
ANFLKHTLAY YSAAGVDVQY MPVAITLFQP QERKY
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