| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_1543 |
|---|
| Symbol | |
|---|
| ID | 7287466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 1383037 |
|---|
| End bp | 1384308 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643584543 |
|---|
| Product | twitching motility protein |
|---|
| Protein accession | YP_002482274 |
|---|
| Protein GI | 220906963 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
|---|
| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGATC CCCAACTTCC CCTCCCTGCT GTGCCTCGCC CCCCGGTGGC TCCCCCGCCC
CCACCCCCCA GCCCTAACCT ATCCAGGATG CCAGGCTCCG CTCAGCCCAA TTCCCAGACT
TTACCGCTGC CCCGTTCCTC TCCCCCCAGC CCGGCTGCAA TGTCACCCCC ACCGGCAACC
ACGGTGACCA CAACGGTGCG CACCCGAACG GGGCCGACGA TGGAGCAGTT GGTCCGGGAA
GCCTATGAAA AAGGATTTTC TGATATTCAC CTGGGAGTGG GTGAGGTGCC CCGTTTTCGC
GATCGCGGTC GTCTGGAAGC CTCCAGTCAC CCCCTCACGG ATGAAGCCAC CTTTGATGCC
TGGTTGGAAG AAATTCTGCA GCCCCACCAG ATTGCCCAGT TTCGTGAACA TCTAGAGTTT
GATGGCGCGA ATCAGTACGA AGGCATGGCG CGGGTGCGGA TCAATGTCTT TGTCTCGCTA
AAGGGTCCGG CCATGGTGCT GCGTCTCATT CCCCTCAAGA TTCTGACGAT CGAACAATTG
GGCTTACCCC CCGTGTTTCA GGATCTCTGC CATTATCACA AGGGGTTGAT TCTGGTCACG
GGTCCCACGG GTTCCGGGAA ATCTACCACC ATGGCGGCAA TGGTGGACTA CATCAACTCG
GAGATGCCCA AGCACATTAT CTCGATTGAA GACCCGATTG AATTTGTGCA TCAAAGCCGT
AAAGCGATGG TGCGGCAGCG GGAAGTGGGC ATTCATACCC TCAAGTTCGA CAATGCTCTG
AAAGCCTCCT TGCGGGAAGA TCCAGATATT ATTCTGATTG GGGAAATGCG CGATCGGGAA
ACCGTGAATA CGGCCCTGAA AGCAGCTCAA ACCGGGCACT TAGTCTTTGG TACCCTACAC
ACCAACAGTG CGGTGAAAAC GATCGAGCGG ATTCTCAACC TCTATAACCC AGAGGAACAG
GGACCGATGC GGGTGCAGGT GGCAGAATCC CTGGTGGCTG TCATTGCTCA GGCGCTGGTG
CGGACCACGG ATGGGAAACG GGCTGCAATC CATGAAATCA TGATCAACAC GGAGGCGATC
AAGGACTATA TTCTTCGGGG TGAAGTAGAG GAAATTGAGG CGATTATTCC CCAATGTACC
TACGACGGGA TGTGTACAAT GAACCAGTGT TTATATGAAC TCTACGAAGC CGGTCGAATT
GATGAGGAAA CCGCTTTAGA AAACTCACCC AAACCGAACG AAATGGCTCA AATTTTGCGA
GGACGGATAT AG
|
|---|
| Protein sequence | MPDPQLPLPA VPRPPVAPPP PPPSPNLSRM PGSAQPNSQT LPLPRSSPPS PAAMSPPPAT
TVTTTVRTRT GPTMEQLVRE AYEKGFSDIH LGVGEVPRFR DRGRLEASSH PLTDEATFDA
WLEEILQPHQ IAQFREHLEF DGANQYEGMA RVRINVFVSL KGPAMVLRLI PLKILTIEQL
GLPPVFQDLC HYHKGLILVT GPTGSGKSTT MAAMVDYINS EMPKHIISIE DPIEFVHQSR
KAMVRQREVG IHTLKFDNAL KASLREDPDI ILIGEMRDRE TVNTALKAAQ TGHLVFGTLH
TNSAVKTIER ILNLYNPEEQ GPMRVQVAES LVAVIAQALV RTTDGKRAAI HEIMINTEAI
KDYILRGEVE EIEAIIPQCT YDGMCTMNQC LYELYEAGRI DEETALENSP KPNEMAQILR
GRI
|
|---|
| |