Gene Cyan7425_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_1397 
Symbol 
ID7287317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp1232508 
End bp1233803 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content52% 
IMG OID643584397 
Productprotein of unknown function DUF214 
Protein accessionYP_002482131 
Protein GI220906820 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.408295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATTC AAACCCATCC CGTCCCTACC CGTGTACAGC CAACCCGATC CAGCCTCAAC 
CAGCCCGTCG CCTTGCAGGA AATTGCCAAA ATGGCGGGAG CAGCCCTGTG GGGGAACAAA
CTCCGCTCTG GTCTGACAAT GCTGGGGGTA ATTATTGGGA TTGGCTCGGT CATTTCCATT
ACTTCGATCG GGCAGGGCAT TCAGAAGAGC GTGGAAAGCC AAATTCGCTC CCTGGGAACA
GATGTCTTGC AAATTTCGGC CGGAGCAGCC CGTAGTGGCA ATATTGTGCA GGGAGCTGGC
TCCATTACCA CCCTGACCTG GGAAGATGCA CAGGCGATCG CCCAAGCGGC CCCCTCAGCC
CGGCTTGTCT CTGCAACCTT ACAGCGTTCC GTTCAGGTGG TGTATGGGGG AACCAATACA
AACACGATTG TCTATGGAAC TGATCTGAAC TACCCAGATG TGCGCAATGT CCATCCCCAG
CTTGGCCGCT ATTTCACCCC AGAGGAATTG CAGGAATCAG CCCAGGTTGC AGTTCTTGGC
CCCACGGTGC AGCAAAAGCT GTTTGGTAAG ACTACCGGAT TGGATGAAAA AATTCGGATC
CAGGGGGAAC TGTACCGTGT GATCGGGATT ATGGAACCCA AAGGCAGTCA GGGCCCCTTT
GATCGGGATG ATGCTATTTT TATACCACTC ACTAGTATGT CCTCCCGGAT TGTCGGCAAC
AATGCCCTGA CTGGAATTTC TGTAAATACC ATCCTGGTGA AAGGAGATAA TCAAACGGCC
CTCAATGCCG CCCGTTTCCA GGTGACCAAT TTATTGCGTT TGCGCCATAA CATTAATAAC
CCTGCCAATG ATGACTTTCG CGTTACGAAT CAAGCAGATT TAATTAATGC TTTTTCTAAT
ACGGTTGGCT TTTTGACCAT TCTCGTTGTA GCGATCGCTG GCATTTCTCT AGTCGTCGGT
GGCATTGGCA TCACTAATAT CATGCTGGTT TCGGTGGTGG AACGCACTCG AGAAATTGGT
CTGCGTAAAG CCCTAGGAGC GACCAAATCA GCCATTCTGG CCCAATTTTT AGTTGAAGCG
ATCGCCCTCT CCACCATTGG CGGTGGAATT GGGGTGGGGG GTGGCATCCT GGTTGCCTTT
GTCGGGTCTC TGCTGTTTCA GTTTCCTTTT ATTGTGGCAG GCTGGTCCAT TGGAGTGGGA
ATGGGACTGG CGATCGGAGT GGGATTGCTA GCTGGGGTGA TGCCCGCTCG CAATGCCGCC
AACCTGGATC CAATCACAGC ATTGAGAAGT GAATAA
 
Protein sequence
MQIQTHPVPT RVQPTRSSLN QPVALQEIAK MAGAALWGNK LRSGLTMLGV IIGIGSVISI 
TSIGQGIQKS VESQIRSLGT DVLQISAGAA RSGNIVQGAG SITTLTWEDA QAIAQAAPSA
RLVSATLQRS VQVVYGGTNT NTIVYGTDLN YPDVRNVHPQ LGRYFTPEEL QESAQVAVLG
PTVQQKLFGK TTGLDEKIRI QGELYRVIGI MEPKGSQGPF DRDDAIFIPL TSMSSRIVGN
NALTGISVNT ILVKGDNQTA LNAARFQVTN LLRLRHNINN PANDDFRVTN QADLINAFSN
TVGFLTILVV AIAGISLVVG GIGITNIMLV SVVERTREIG LRKALGATKS AILAQFLVEA
IALSTIGGGI GVGGGILVAF VGSLLFQFPF IVAGWSIGVG MGLAIGVGLL AGVMPARNAA
NLDPITALRS E