Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_1397 |
Symbol | |
ID | 7287317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | - |
Start bp | 1232508 |
End bp | 1233803 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643584397 |
Product | protein of unknown function DUF214 |
Protein accession | YP_002482131 |
Protein GI | 220906820 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.408295 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAATTC AAACCCATCC CGTCCCTACC CGTGTACAGC CAACCCGATC CAGCCTCAAC CAGCCCGTCG CCTTGCAGGA AATTGCCAAA ATGGCGGGAG CAGCCCTGTG GGGGAACAAA CTCCGCTCTG GTCTGACAAT GCTGGGGGTA ATTATTGGGA TTGGCTCGGT CATTTCCATT ACTTCGATCG GGCAGGGCAT TCAGAAGAGC GTGGAAAGCC AAATTCGCTC CCTGGGAACA GATGTCTTGC AAATTTCGGC CGGAGCAGCC CGTAGTGGCA ATATTGTGCA GGGAGCTGGC TCCATTACCA CCCTGACCTG GGAAGATGCA CAGGCGATCG CCCAAGCGGC CCCCTCAGCC CGGCTTGTCT CTGCAACCTT ACAGCGTTCC GTTCAGGTGG TGTATGGGGG AACCAATACA AACACGATTG TCTATGGAAC TGATCTGAAC TACCCAGATG TGCGCAATGT CCATCCCCAG CTTGGCCGCT ATTTCACCCC AGAGGAATTG CAGGAATCAG CCCAGGTTGC AGTTCTTGGC CCCACGGTGC AGCAAAAGCT GTTTGGTAAG ACTACCGGAT TGGATGAAAA AATTCGGATC CAGGGGGAAC TGTACCGTGT GATCGGGATT ATGGAACCCA AAGGCAGTCA GGGCCCCTTT GATCGGGATG ATGCTATTTT TATACCACTC ACTAGTATGT CCTCCCGGAT TGTCGGCAAC AATGCCCTGA CTGGAATTTC TGTAAATACC ATCCTGGTGA AAGGAGATAA TCAAACGGCC CTCAATGCCG CCCGTTTCCA GGTGACCAAT TTATTGCGTT TGCGCCATAA CATTAATAAC CCTGCCAATG ATGACTTTCG CGTTACGAAT CAAGCAGATT TAATTAATGC TTTTTCTAAT ACGGTTGGCT TTTTGACCAT TCTCGTTGTA GCGATCGCTG GCATTTCTCT AGTCGTCGGT GGCATTGGCA TCACTAATAT CATGCTGGTT TCGGTGGTGG AACGCACTCG AGAAATTGGT CTGCGTAAAG CCCTAGGAGC GACCAAATCA GCCATTCTGG CCCAATTTTT AGTTGAAGCG ATCGCCCTCT CCACCATTGG CGGTGGAATT GGGGTGGGGG GTGGCATCCT GGTTGCCTTT GTCGGGTCTC TGCTGTTTCA GTTTCCTTTT ATTGTGGCAG GCTGGTCCAT TGGAGTGGGA ATGGGACTGG CGATCGGAGT GGGATTGCTA GCTGGGGTGA TGCCCGCTCG CAATGCCGCC AACCTGGATC CAATCACAGC ATTGAGAAGT GAATAA
|
Protein sequence | MQIQTHPVPT RVQPTRSSLN QPVALQEIAK MAGAALWGNK LRSGLTMLGV IIGIGSVISI TSIGQGIQKS VESQIRSLGT DVLQISAGAA RSGNIVQGAG SITTLTWEDA QAIAQAAPSA RLVSATLQRS VQVVYGGTNT NTIVYGTDLN YPDVRNVHPQ LGRYFTPEEL QESAQVAVLG PTVQQKLFGK TTGLDEKIRI QGELYRVIGI MEPKGSQGPF DRDDAIFIPL TSMSSRIVGN NALTGISVNT ILVKGDNQTA LNAARFQVTN LLRLRHNINN PANDDFRVTN QADLINAFSN TVGFLTILVV AIAGISLVVG GIGITNIMLV SVVERTREIG LRKALGATKS AILAQFLVEA IALSTIGGGI GVGGGILVAF VGSLLFQFPF IVAGWSIGVG MGLAIGVGLL AGVMPARNAA NLDPITALRS E
|
| |