Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_1304 |
Symbol | rplE |
ID | 7287225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | + |
Start bp | 1134397 |
End bp | 1134939 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643584308 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_002482042 |
Protein GI | 220906731 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.604119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAAC GATTAAAAAC CTATTACCTG GAAAATGCTG TTCCCAAATT GATGGAACAG TTTAAGTACA AAAACATCCA TCAGGTGCCT AAACTCGTCA AGATTACGAT CAATCGGGGC TTAGGAGAAG CGGCTCAGAA TGCCAAATCT CTTGAGGCCA GTCTGAATGA AATCGCCCTG ATTGCTGGAC AAAAACCCGT GGTGACGCGG GCCAAGAAAG CAATCGCCGG TTTTAAGATT CGTCAAGGTA TGCCCGTCGG AATTATGGTC ACGTTGCGTT CCGATCGGAT GTATGCCTTT TTCGACCGTT TGATCAACCT GGCTTTACCC CGGATTCGTG ACTTCCGCGG GGTGAATCCC AAAAGCTTTG ATGGGCGGGG CAACTACTCT TTGGGGTTGC GCGAGCAATT GATTTTTCCA GAAATCAGTT ACGACAGTAT TGATCAAATG CGCGGCATGG ATGTTTCGAT CATCACCACC GCTACAACGG ATGAAGAAGG TCGGGCTTTA TTAAAAGTCA TGGGAATGCC CTTTCGGGAT TAG
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Protein sequence | MAQRLKTYYL ENAVPKLMEQ FKYKNIHQVP KLVKITINRG LGEAAQNAKS LEASLNEIAL IAGQKPVVTR AKKAIAGFKI RQGMPVGIMV TLRSDRMYAF FDRLINLALP RIRDFRGVNP KSFDGRGNYS LGLREQLIFP EISYDSIDQM RGMDVSIITT ATTDEEGRAL LKVMGMPFRD
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