Gene Cyan7425_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_1292 
SymbolrplC 
ID7287213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp1128592 
End bp1129230 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content53% 
IMG OID643584296 
Product50S ribosomal protein L3 
Protein accessionYP_002482030 
Protein GI220906719 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.67398e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGTCG GTATTTTGGG GACAAAGTTG GGGATGACTC AGATCTTCGA TCAGGAGAGA 
CGGGCCATTC CTGTGACGGT TGTACAGGCC GGCCCCTGTC CCATCACCCA GATTAAAACT
AAGCAAACTG ACGGCTATGC AGCGATTCAG GTTGCTTTTG GTGAAGTTAG AGCAAAGTCC
TTGAGCAAAG CCGAACTGGG ACATCTGGCT AAATCGAACA CCGCACCCAT GCGCCACCTG
CACGAGTATC GCACCGGGGA GGTCGACCAA TTTCAAGTGG GTCAAGTTTT AAAAGCTGAT
CTGTTTAGTG CTGGCCAGGT TGTAGATGTA ACTGGCACCA GTATTGGTCG GGGTTTTGCG
GGATACCAAA AGCGGCATAA CTTCAAGCGC GGACCTATGG CTCACGGTTC TAAAAACCAC
CGGCTTCCCG GTTCGACTGG CGCAGGTACA ACCCCCGGAC GGGTTTATCC TGGCAAGCGG
ATGGCTGGAC AACTAGGCAG TGCCCGCACC ACGATTCGTC AGTTGACGAT CGTTCGTGTC
GATCCAGAAC GCAACCTGGT TTTAATTAAA GGAGCGGTTC CGGGCAAGCC AGGGGCTTTA
GTCAGCATTA CTCCTGCCAA CTCTGTTGGT CGTAAGTAA
 
Protein sequence
MAVGILGTKL GMTQIFDQER RAIPVTVVQA GPCPITQIKT KQTDGYAAIQ VAFGEVRAKS 
LSKAELGHLA KSNTAPMRHL HEYRTGEVDQ FQVGQVLKAD LFSAGQVVDV TGTSIGRGFA
GYQKRHNFKR GPMAHGSKNH RLPGSTGAGT TPGRVYPGKR MAGQLGSART TIRQLTIVRV
DPERNLVLIK GAVPGKPGAL VSITPANSVG RK