| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_1174 |
|---|
| Symbol | |
|---|
| ID | 7287094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 1013253 |
|---|
| End bp | 1014821 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643584181 |
|---|
| Product | All-trans-retinol 13,14-reductase |
|---|
| Protein accession | YP_002481916 |
|---|
| Protein GI | 220906605 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAAAGCT TTGATTATGT GATTTTAGGA GCGGGATTGG GGGGACTATC AGCCGCTGCT
TGCCTTGCCC GCCAGGGCCA TCGGGTGGTG GTGCTGGAAA AACATTATCT GCCTGGAGGG
TGCTGTCATA CCTTTGACTA TGGTCAATAT CGGTTTTGTG CGGATGTTCA TTACATTTCT
CAGTGTGCCC CTGAACAGAC GATCGGCAAA TTTCTAGATT ACATCCAGCG TCATGTTCCC
TTTAATTCGC TTGACCCCGA CTGTATCGAT CGGGTGATTA CACCGGACGT CGATTTCAGA
ATTCCCCTCG GTTGGGAGCG ATTTCGCGAT CGCCTGCTCT TTACCTATCC CGAAGAAGCC
GAACCGATCA ACCGCTATTG TGACGAGATC CAGAGATTGC ATCAGGACAT TCGCCGTCTG
GTGCGGGAGG TGCGCTGGTA TAACCAGAAA TGGACAGACT GGCTGAAACT GCCCCGCTAC
TGGAACCTCT ATGCCAAGCG GAATTGGACG CTCCAGGATC TGTATGAGCA CGTTGGACTT
TCTCCCAAAC TGCAAGCATT ACTGGCAGGA CAGAGTGGCG ACTATGCCCT CCCCCCCAAT
CAGATTGCCC TGCTCACCCA TACTTCCCTG GTGTGGGACT ACTCGGAGGG AGCCTACTAC
CCGCAGCACC ATTTCAAGCA TTTTGTTGAC ACGATCGTTG AGTCCATTAC AGCTAACGGC
GGGGTGATCC AGTTTTCGAC TCCGGTTGAA CAGATCCAGG TGGAGGTGGG CCAAGTGACC
AGTGTGCGGG CGGGAAATCA AACCTATCAG GCTAGACAGG CCTATATCAG CGACTTGGAT
CCCAAACTGA CGGTGCAGTT GATGCCTAAT CCTGCGGCCC TGAGCCAGGC AGAGTACCAT
CGCCTCACCG ATTACGAATA TTCTGCTAGT GCGTTTAACA TTTATCTGGG GTTAGATGAA
CGCTTCCAGC CCGAGAACTA CGGCATTGGC AACTGGAACC TCTGGTATTA CCCCACGGGT
GATCTTAACC AGGAATATGA GCAGCAATTG CAGGGCAATT TAGATCATCC CTGGATTTTC
CTCTCTTGCC CAACAATGAA ATCCAGTGCA GGGGGGATGG CTCCAGCCGG GCATCATGTC
CTGGAAATTG CCACAGTCTG TCCCTATCAG CCATTCAAAC AGTTACAGGA GACCGATAGC
GCTGCCTATA AAGCCAGAAA ACGCCAGGTC TATCAGCAGG TCATGGCCAG TGTGCGGGAT
CTGATTCCCG ATGTCGATCG CTATGCCCGC ATGAAGGTTT ATGGCACGCC CACCACGAGC
GAATATTTTC TGGGACAACC CCAAGGCAAT ATCTATGGAG CTAACCTCAT TCCCCGTCAG
GTAGGGCTGA ACCGGCTCGG CTACACTACA GAGTTACCCA ACCTGTTTCT GGTCGGAGCC
AGTGCGGGGT ATCCCAGTGT ACCGGGGGTG ATTGGCAATG GGATGGATGT GGTGGAACTG
CTCACGGGTG AATCTCCCTG GAAGCTGAGG GAAACCCAGG AGCGTGAACC TATCTTGCAA
CAGGTCTGA
|
|---|
| Protein sequence | MESFDYVILG AGLGGLSAAA CLARQGHRVV VLEKHYLPGG CCHTFDYGQY RFCADVHYIS
QCAPEQTIGK FLDYIQRHVP FNSLDPDCID RVITPDVDFR IPLGWERFRD RLLFTYPEEA
EPINRYCDEI QRLHQDIRRL VREVRWYNQK WTDWLKLPRY WNLYAKRNWT LQDLYEHVGL
SPKLQALLAG QSGDYALPPN QIALLTHTSL VWDYSEGAYY PQHHFKHFVD TIVESITANG
GVIQFSTPVE QIQVEVGQVT SVRAGNQTYQ ARQAYISDLD PKLTVQLMPN PAALSQAEYH
RLTDYEYSAS AFNIYLGLDE RFQPENYGIG NWNLWYYPTG DLNQEYEQQL QGNLDHPWIF
LSCPTMKSSA GGMAPAGHHV LEIATVCPYQ PFKQLQETDS AAYKARKRQV YQQVMASVRD
LIPDVDRYAR MKVYGTPTTS EYFLGQPQGN IYGANLIPRQ VGLNRLGYTT ELPNLFLVGA
SAGYPSVPGV IGNGMDVVEL LTGESPWKLR ETQEREPILQ QV
|
|---|
| |