| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_1004 |
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| Symbol | rpsD |
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| ID | 7286922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011884 |
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| Strand | - |
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| Start bp | 820997 |
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| End bp | 821611 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643584014 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_002481751 |
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| Protein GI | 220906440 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000950762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0219645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCGTT ATCGAGGCCC CCGCCTCCGA GTGATCCGTC GTTTAGGAGA TCTGCCTGGT
CTCACCCGCA AAGCTGTGCC CAGCCGTCGT GCCTATCCCC CCGGTCAGCA TGGTCAGGCC
CGCAAAAAGC GTTCAGAGTA TGCCATGCGT CTGGAAGAAA AACAGAAGCT GCGTTTCAAC
TATGGTCTCA CAGAACGGCA GCTCGTTCGG TACGTTCGTC GCGCTCGTCG GGTGAGTGGT
TCCACTGGGT TGGCCCTGCT GCAATTGCTG GAAATGCGCC TGGACAACAT TATTTTCCGT
CTCGGCATGG CTCCGACGAT TCCTGCTGCC CGCCAGTTGG TCAATCACGG TCACGTTACA
GTCAATGGCC GGGTGGTTTC CATTCCCAGT TACCAGTGTC GCCCTGGCAA TGAGATTGGG
ATCAGAAATA AGGAAAACTC TCGCCGCTTA GCCGAAGAAA ACCTGAAGTT TCCCGGTCTG
GCCAACCTGC CTACCCACCT GGAGCTGGAT AAAAACAAGC TCATGGCGAA AGTGAACAGT
GTGGTAGAGC GGGAATGGGT TGCCCTGCAG GTCAATGAAC TGCTGGTGGT GGAATACTAC
TCCCGTAAAG TCTAG
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| Protein sequence | MARYRGPRLR VIRRLGDLPG LTRKAVPSRR AYPPGQHGQA RKKRSEYAMR LEEKQKLRFN
YGLTERQLVR YVRRARRVSG STGLALLQLL EMRLDNIIFR LGMAPTIPAA RQLVNHGHVT
VNGRVVSIPS YQCRPGNEIG IRNKENSRRL AEENLKFPGL ANLPTHLELD KNKLMAKVNS
VVEREWVALQ VNELLVVEYY SRKV
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