Gene Cyan7425_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_1003 
SymbolprfA 
ID7286921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp819804 
End bp820898 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content53% 
IMG OID643584013 
Productpeptide chain release factor 1 
Protein accessionYP_002481750 
Protein GI220906439 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000454931 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0279462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAA GCTATCTTCT GGACAAACTG AAATCTGTTG AACTCACGTT TCATGAACTG 
ACCCGGCGGT TGGCGGATCC AGAGGTGGCC ACAGACCCGG AAGAGTTCCA GCGGGTTGCC
AAGGCCAGAG CTTCCCTGGA AGAAACGGTG GACACCTACG ACACCTGGAA AACGGTACAG
CAACACTTAG CTGAGGCCCG TCAGATTGCC AGAGAAGCTG CCTCCGATCC AGAACTGCAG
GAGATGGCGG TTCAGGAAGT GAATGAACTG ACTGAAAAGT CGGCCCATCT GGAACAGCGG
TTAAAAATTC TCTTGCTACC CCGCGACCCC AATGATGATA AGAATATCAT GCTGGAAATT
CGGGCTGGCA CTGGTGGTGA TGAAGCCAGT ATCTGGGCTG GGGATCTGGT CCGCCTCTAT
TCTCGCTATG CTGAAAGCCA GCGCTGGCGG GTCAAGCTGG TGAGTGAATC CCTGGGGGAA
ATGGGAGGCT TTAAGGAAGC AATTCTGGAA ATCCAGGGAG AACAGGTTTA CAGCAAACTG
AAGTACGAAG CTGGGGTACA TCGAGTGCAA CGGGTTCCAG CCACAGAAGC CTCTGGACGG
GTACATACTT CCACGGCGAC AGTGGCGATC ATGCCGGAAG TGGATGAGGT GGAAGTAAAG
ATCGACCCGA AAGATATCGA ACTCACCACG GCGCGATCAG GGGGAGCCGG CGGTCAAAAT
GTCAACAAGG TGGAAACGGC TGTCGATCTG TTCCACAAAC CCACTGGAAT CCGGATTTTC
TGTACCGAGG AGCGATCGCA ACTGCAAAAC AAGGAACGGG CCATGCAAAT TCTGCGGGCA
AAGCTCTACG AGATGAAATT GCAGGAGCAG CAGTCTGAAA TTACCAGTCG TCGTCGTTCC
CAGGTGGGGA CAGGGTCCCG TTCTGAAAAA ATTCGCACCT ACAACTATAA GGACAACCGC
GCCACTGATC ATCGCCTGGG TCAAAACTTT CCGCTCAATC AGGTTCTGGA AGGGGACATA
GAAGGGATCA TCCAGGCCTG CATTACCCAG GATCAGCAGG AACAACTGGC AGAACTTGCA
GCGGCTACAG CTTAA
 
Protein sequence
MAESYLLDKL KSVELTFHEL TRRLADPEVA TDPEEFQRVA KARASLEETV DTYDTWKTVQ 
QHLAEARQIA REAASDPELQ EMAVQEVNEL TEKSAHLEQR LKILLLPRDP NDDKNIMLEI
RAGTGGDEAS IWAGDLVRLY SRYAESQRWR VKLVSESLGE MGGFKEAILE IQGEQVYSKL
KYEAGVHRVQ RVPATEASGR VHTSTATVAI MPEVDEVEVK IDPKDIELTT ARSGGAGGQN
VNKVETAVDL FHKPTGIRIF CTEERSQLQN KERAMQILRA KLYEMKLQEQ QSEITSRRRS
QVGTGSRSEK IRTYNYKDNR ATDHRLGQNF PLNQVLEGDI EGIIQACITQ DQQEQLAELA
AATA