Gene Cyan7425_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_1000 
Symbol 
ID7286918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp814046 
End bp814705 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content48% 
IMG OID643584010 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_002481747 
Protein GI220906436 
COG category[R] General function prediction only 
COG ID[COG0457] FOG: TPR repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.810235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0608831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTC AGTTTCGATC GGCTTATTTA CAGTCGGGTT TAAAATGCCT TTTACCCATG 
TTGGGAACAG CGATCGCCCT AGCTACAGTT ACAGCAATTT CCCCAGTACA GGCTGCCCTC
TCTCCTGCAG TTAGTTCTCC TGAGACTCCT AATCTACCGG CAACCAATCC ACCAGATAGT
TTACGCAATG CCAATGACTA TTTCAACACG GGCAACGATC ACCTGCAACA GGGAAATTAT
GCCGCCGCCG TGACGGATTA TACCCAGGCT CTGCAGCGCA ATCCCAACTT TGTGGAAGCT
TATACAAATC GGGGAACAGT GCGCACTATT CAGGGGGACT ATCCTGGGGC GATCGCTGAC
TTTGATCAAG CGATTCGGAT TGATCCTAAT AACTCGACTG CCTATGCCAA TCGGGGCACT
ACCCGAACCA TTCAGGGCAA TTTCCCAGAA GCGATCGCTG ATTTTACCCA GGCAATTCGG
CTGAATCCCA GTGATCCTAC GCCCTACTAT AATCGAGGAG TTGCCCGTGC CTTAAGTGGT
GACAAACAAA GCGCGATTGG CGATCTGCAG CAGGCGATAT CTCTTTATCA AAAACAGGGT
AGTTTACAAG CCTCTCAAGA AGCCCGTAAT TTACTCAATC AAGTTCAAAC TTTGCAGTAA
 
Protein sequence
MNIQFRSAYL QSGLKCLLPM LGTAIALATV TAISPVQAAL SPAVSSPETP NLPATNPPDS 
LRNANDYFNT GNDHLQQGNY AAAVTDYTQA LQRNPNFVEA YTNRGTVRTI QGDYPGAIAD
FDQAIRIDPN NSTAYANRGT TRTIQGNFPE AIADFTQAIR LNPSDPTPYY NRGVARALSG
DKQSAIGDLQ QAISLYQKQG SLQASQEARN LLNQVQTLQ