Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_1000 |
Symbol | |
ID | 7286918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | + |
Start bp | 814046 |
End bp | 814705 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643584010 |
Product | Tetratricopeptide TPR_2 repeat protein |
Protein accession | YP_002481747 |
Protein GI | 220906436 |
COG category | [R] General function prediction only |
COG ID | [COG0457] FOG: TPR repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.810235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0608831 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATTC AGTTTCGATC GGCTTATTTA CAGTCGGGTT TAAAATGCCT TTTACCCATG TTGGGAACAG CGATCGCCCT AGCTACAGTT ACAGCAATTT CCCCAGTACA GGCTGCCCTC TCTCCTGCAG TTAGTTCTCC TGAGACTCCT AATCTACCGG CAACCAATCC ACCAGATAGT TTACGCAATG CCAATGACTA TTTCAACACG GGCAACGATC ACCTGCAACA GGGAAATTAT GCCGCCGCCG TGACGGATTA TACCCAGGCT CTGCAGCGCA ATCCCAACTT TGTGGAAGCT TATACAAATC GGGGAACAGT GCGCACTATT CAGGGGGACT ATCCTGGGGC GATCGCTGAC TTTGATCAAG CGATTCGGAT TGATCCTAAT AACTCGACTG CCTATGCCAA TCGGGGCACT ACCCGAACCA TTCAGGGCAA TTTCCCAGAA GCGATCGCTG ATTTTACCCA GGCAATTCGG CTGAATCCCA GTGATCCTAC GCCCTACTAT AATCGAGGAG TTGCCCGTGC CTTAAGTGGT GACAAACAAA GCGCGATTGG CGATCTGCAG CAGGCGATAT CTCTTTATCA AAAACAGGGT AGTTTACAAG CCTCTCAAGA AGCCCGTAAT TTACTCAATC AAGTTCAAAC TTTGCAGTAA
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Protein sequence | MNIQFRSAYL QSGLKCLLPM LGTAIALATV TAISPVQAAL SPAVSSPETP NLPATNPPDS LRNANDYFNT GNDHLQQGNY AAAVTDYTQA LQRNPNFVEA YTNRGTVRTI QGDYPGAIAD FDQAIRIDPN NSTAYANRGT TRTIQGNFPE AIADFTQAIR LNPSDPTPYY NRGVARALSG DKQSAIGDLQ QAISLYQKQG SLQASQEARN LLNQVQTLQ
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