| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_0864 |
|---|
| Symbol | |
|---|
| ID | 7286780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 684693 |
|---|
| End bp | 685562 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643583873 |
|---|
| Product | 2,3-dimethylmalate lyase |
|---|
| Protein accession | YP_002481611 |
|---|
| Protein GI | 220906300 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000979692 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000000949403 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCGG CCCAGCAATT ACGCCAACTC CTCAGTCAGG ATGAGAGCCT TGTTTTACCG
GGAGTGTACG ATGCCCTGGG GGCAAAGCTG GCGGCGGAGG CAGGCTTTGA GGCGGTGTTT
ACCAGTGGAT TTGGGCTGGC CGCTGCCACA CTGGGTTACC CTGACTACGG TTTGATGACA
GCCACAGAAG TGCTGGAAAG TGTGGCACAC ATCGCTCAGT CCATTGACCT TCCTGTTATT
GCTGATCTGG ATACAGGCTA TGGCAATCCC CTCAACGTCA TCCGTACTGT GCAGGAAGCG
GTGCGATCGG GGGTGGGGGG TATCATCCTG GAGGATCAGG AATGGCCCAA AAAGTGCGGT
CACTTCAGTG GTAAGCGGGT GATTCCTGCC GCAGACCAGG TGGAAAAACT GAAGGCAGCG
ATTTATGCCA GGGGAGCCTA TCCGCTTTTA ATCATTGCCC GTACTGATGC CCGTGCTCCC
TTAGGATTAG CAGCGGCCCT GGAGCGGGGA CGAGCCTATG TCCAGGCGGG TGCGGATGTG
GTGTTTGTCG AAGCTCCCCA ATCCGTAGAT GAGTTACGGG CGATCGCTAC AGCCTTTCCT
GACGTCCCCC TGCTGGCCAA CATGATCGAA GGTGGTAGAA CGCCTCTGTG CAGTCCTAAG
GACCTGGCCC AACTTGGCTT TAAGCTGGTT GTTTTTCCCC TATCTGGCTT ATTTGCTGCG
ACCCAGGCGA TCCGGGAGTG TTTTCAGCAA CTCCGTCGGG AGGGAACCAC AGTTGGTTTG
GCTAACTCGA TCGATTTCAA TGAATTTGAG CAAATTATTG ATCTGCCCCG CTACCGGCAA
TGGGAACGGC AATTTACCCC ACCCGCTTAA
|
|---|
| Protein sequence | MSAAQQLRQL LSQDESLVLP GVYDALGAKL AAEAGFEAVF TSGFGLAAAT LGYPDYGLMT
ATEVLESVAH IAQSIDLPVI ADLDTGYGNP LNVIRTVQEA VRSGVGGIIL EDQEWPKKCG
HFSGKRVIPA ADQVEKLKAA IYARGAYPLL IIARTDARAP LGLAAALERG RAYVQAGADV
VFVEAPQSVD ELRAIATAFP DVPLLANMIE GGRTPLCSPK DLAQLGFKLV VFPLSGLFAA
TQAIRECFQQ LRREGTTVGL ANSIDFNEFE QIIDLPRYRQ WERQFTPPA
|
|---|
| |