| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_0568 |
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| Symbol | |
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| ID | 7286477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011884 |
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| Strand | + |
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| Start bp | 377311 |
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| End bp | 378429 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643583575 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_002481320 |
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| Protein GI | 220906009 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.604456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAGTA AAAACGATCC ATTGACCGTT GACTCGCCAG AACCTCTGGA GATGCATCCT
CCCTTGCTGG ATCCTTTCCT GGACCTCGAG GCAGAAGATC CAGAAGCAGT GATGGCAGAA
CTGCACATTG ATAACCTAGC GGCCCGTTCC TCTGGCTATC GCAAAACGGG TTTAGACGAT
GCAGTGGGAG CTTTTCTGAA AGACATGGCC CGCTATCCCC TGCTGCAGCC AAGCGAAGAA
ATTGAACTGG CCCGGCGGGT GAAATATCTG GTGGAATTGA GTGAATTAAA AGACCAGTTA
GGACGGCAGT TGGGTCGATC GGCTACCCTC CCGGAAGTGG CTGCGGCAAT GAACCTGACG
GAACAACAAC TGCAGATCCG CATCTATCGG GGCCAGGTGG CTAAAAGTAA GATGATCCGC
TCCAATCTCC GCCTGGTGGT TTCCATTGCT AAACGCTATC TCAATCGGGG CGTGCCTTTT
TTAGATCTGG TGCAGGAAGG GGCTTTAGGG CTAAATCGGG CCACAGAAAA GTTTGATCCC
GAAAAAGGCT TTAAGTTCTC CACCTATGCC TACTGGTGGA TTCGGCAGGG CATTACCCGG
GCGATCGCCA ATGACTCCCG CACCATTCGT CTGCCCATCC ACATTGTGGA AAAACTGAAT
AAGCTGAAAA AACTGCAACG CCATCTCAAA AAGGAACTGC AGCGCAATCC GACGGAACAG
GAACTGGCAG ATGCTCTGGA AATTACCCTG GAACAATTGC AAATGTTGCA GCGGGCCAGA
CAGCAGGCCT TATCGCTGAA TCGCCGGGTG GGTCGGGAAG AAGATACAGA ATTGCTGGAT
CTGTTGGAAG CGGACTCCAC CCAATCCCCG GAAAAACAGA TGGGAGAGGT GATGATGCGT
CAGGAAATCT CGCAACTGTT GGATCTGGTG CTGACCAAAC AGGAACGGGA TGTGATCATT
CTGCGCTATG GTCTGGTCAG TGGGGAACCC AATACCCTGG AGGAAGTCAG TGGGTTGTTC
AATCTGTCCA GGGAACGGGT GCGGCAGATC CAGAATAAAG CGATCGGGAA ACTGCGCCGT
TCTGCCATTG CCCACCATCT ACGGAACTGG TTGCGCTAG
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| Protein sequence | MLSKNDPLTV DSPEPLEMHP PLLDPFLDLE AEDPEAVMAE LHIDNLAARS SGYRKTGLDD
AVGAFLKDMA RYPLLQPSEE IELARRVKYL VELSELKDQL GRQLGRSATL PEVAAAMNLT
EQQLQIRIYR GQVAKSKMIR SNLRLVVSIA KRYLNRGVPF LDLVQEGALG LNRATEKFDP
EKGFKFSTYA YWWIRQGITR AIANDSRTIR LPIHIVEKLN KLKKLQRHLK KELQRNPTEQ
ELADALEITL EQLQMLQRAR QQALSLNRRV GREEDTELLD LLEADSTQSP EKQMGEVMMR
QEISQLLDLV LTKQERDVII LRYGLVSGEP NTLEEVSGLF NLSRERVRQI QNKAIGKLRR
SAIAHHLRNW LR
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