Gene Ddes_2332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2332 
Symbol 
ID7286050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand- 
Start bp2805877 
End bp2806851 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content57% 
IMG OID643583154 
Productdiguanylate cyclase with PAS/PAC sensor 
Protein accessionYP_002480904 
Protein GI220905592 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.532356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGGCC GTGTAAAAAC TATGAGCAGC CTCAGTCTTG CCACATTGAT GACCGTTCTG 
GACACGCTGC CCAATGCCGT CTTTGTCAAG GGTGCCGACC TGCGTTTTAC GTTCATCAAC 
AGGGCATATG AAAAAATGTT CGGCGTGAGC AGAAAGGACG TTCTGGGAAA AACTGTTCTG 
GACCTGGAAT ACCTGCCGGA AGAAGACAGG AAAATGTACC AGTCTGAAGA CAGGGAGATG 
GTCCGCCGGC AAGAGGTGAG CCACCACGTG CGCAGTTATC TGTTTGCAGA CGGCAAGGAG 
CACACCTGTC TTTACTGGAG CGGCGGCTTT GAAGACGAAA ACGGCGTACG CGGCCTTTTG 
GGTGTCATTG TGGATATCGC GGAGCAAAGC CATACCATCG GCGCGCTGCG CAGCCAGCTT 
GATTCTATGA TCACCAGGGT CAGGCAGGCT GACGAAAGCA GCCTGACAGA CGCGCTCACC 
GGGCTGTATA CCCGCAAATA TCTGGATATG GTGCTGGGGC GGTACACCCG GCTGGAGAAA 
AAGCCTTTTT GCTGCATCAT GCTGGATGTG GACCATTTCA AGCAGATCAA CGACAGTTTC 
GGCCATCTTG TGGGCGACAG TGTGTTGAAA GACGTGGCGC AGGTTATCCG TCGCTGTGTG 
CGTGAAATGG ATACGGTATG TCGCTATGGC GGCGAAGAGT TTGTGGTGCT GATGCCCGGC 
AGCCTTCTGG AACAGGCTGA ACAGGCTGCG GAGCGGATTC GCAGGGCTGT TTCCGGCATG 
ATAAGCGGGC CTGACAGCCG GCCTGTGACC GTCAGTCTCG GGTGCAGCGA ATACGAAATG 
GATGAAGACG CCTTGCAGGT TCTGCACCGG GCAGACAAGG CCCTTTATGG CGCCAAGCGC 
TCCGGACGCA ACCGGGTGTG GGTGGCGCGG CGCAATCCGG TTGCTGCCGT GCATGCCGGG 
CCAGGTTGCC GCTGA
 
Protein sequence
MMGRVKTMSS LSLATLMTVL DTLPNAVFVK GADLRFTFIN RAYEKMFGVS RKDVLGKTVL 
DLEYLPEEDR KMYQSEDREM VRRQEVSHHV RSYLFADGKE HTCLYWSGGF EDENGVRGLL 
GVIVDIAEQS HTIGALRSQL DSMITRVRQA DESSLTDALT GLYTRKYLDM VLGRYTRLEK 
KPFCCIMLDV DHFKQINDSF GHLVGDSVLK DVAQVIRRCV REMDTVCRYG GEEFVVLMPG 
SLLEQAEQAA ERIRRAVSGM ISGPDSRPVT VSLGCSEYEM DEDALQVLHR ADKALYGAKR 
SGRNRVWVAR RNPVAAVHAG PGCR