Gene Ddes_2328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2328 
Symbol 
ID7286046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2801190 
End bp2802875 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content58% 
IMG OID643583150 
ProductAMP-binding domain protein 
Protein accessionYP_002480900 
Protein GI220905588 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAA AAGTTCGCCA GCGCCAGGCA CAGTTTGAAC TGCGCGAATG GACGCTAGGC 
CAGATTCTTG ACCATACGGT AAGCCGGTTC CCCGACAGGG AAGCCCTTGT TTACGCCGAC
CGCGACTACC GTCAGACCTG GCGGGAATTT GGCGACATGG TGGACCGCTT CGCCAAGGGG
CTGATGGCGA TGGGCATCCA GAAAGGCGAA AAAGTGGCCG TATGGGCTAC CAACGTGCCG
TACTGGGTGG CCCTGCAATT TGCCACGGCC AAGATCGGGG CCATACTGAT TACGGTAAAT
ACCAATTACC GCGAGCATGA ACTGCGCTAC CTGCTTACCC ATTCAGAATG CGAAAACATT
TTTCTTATCG ACAGTGTGCG CGACCATGAC TATCTGGAAA CCCTGTACCG CATCGCGCCC
GAACTGCGCG TACAGGCCCG ACGGTCCTTT GTGTGCAACA GCCTGCCGCA CCTGAAGCGC
GTATGCTTTC TGGGCATGGA AAAGCACCGG GGCATGTATT CCGTACCGGA AATACTCTCC
CTGTCGGTCA TGGTGGATGA CGAAGAATAC AAGGCACGGC AGGATTCACT GCATCCCTGG
GATGTCATCA ACATGCAGTA TACCTCGGGC ACCACGGGCT TTCCCCGCGG GGTCATGCTG
ACCCATGTGG GCGTAGGTCT CAACGGTTAC TGGATAGGAC GCCACCAGAA CTTCGGCCCT
GAAGACAGGG TCTGCCTGCC CGTGCCGCTC TTTCACTGCT TCGGTTGCGT GCTGGGGGTT
TCGGCCTGCG TCAACCACGG GGCCGCCATG GTGATTCTTG AGTCCTTCAA CCCGCTCAAG
GTGCTGGCCG CGGTGGATTC CGAACGCTGC ACGGCCCTGT ACGGCGTACC CACAATGTTT
CTGGCAGAAC TGGAGCACAA GCTCTTTCAC CGTTTTGACA TGTCCAGTCT GCGCACGGGC
ATCATGGCCG GCTCTGTTTG CCCAGAACCG CTCATGCGCC GCGTCATTGA CGACATGAAC
ATGAAAGAGA TCACCATCTG CTACGGGCTT ACGGAAGGCT CGCCCGTCAT GACCCAGTCC
GACAGCCACG ACAGCCTGCA ACTGCGCTGC GAAACCGTGG GCTGCGCCAT GCCCGGCATT
GAGGTGCGCG TGGCCGATCC CGAAACATGC GAAGAACTGC CGCGCGGACA GGTGGGCGAA
ATTCTCTGCC GGGGCTATAA TGTCATGAAA GGGTACTACA ACATGCCCGA AGACACGGCC
CGCGCCGTCA GCCCTGACGG CTGGCTGCAC TCCGGGGACC TCGGCGTTAT GGATGAAAAC
GGCTACCTGC GCATCACGGG GCGCATCAAG GATATGATTA TCCGAGGCGG TGAAAACGTC
TACCCGCGTG AAATAGAAGA ATATCTCATG GGCATGCCCG GTGTGCTGGA CGTGCAGGTG
GTGGCTGTGC CAAGCTTCAA GTATGGCGAA GAGGTGGCGG CCTTCATTAT TCCCCGCCCC
GGCGTGGAAA TCGGCCCGGA AGACGTGCGG GCTTTCTGCC GCGGCAAAAT CGCCTGGTTC
AAGATACCCA AGTATGTCGC TGTAATAAGT GGCTTTCCCC TTACTGCTAG CGGCAAGATA
CAAAAATATA AGCTGCGTGA GCAGGCTGCC CAGATGTGGC CTGAAGCTAT GGAACCCAAA
CAGTAG
 
Protein sequence
MEEKVRQRQA QFELREWTLG QILDHTVSRF PDREALVYAD RDYRQTWREF GDMVDRFAKG 
LMAMGIQKGE KVAVWATNVP YWVALQFATA KIGAILITVN TNYREHELRY LLTHSECENI
FLIDSVRDHD YLETLYRIAP ELRVQARRSF VCNSLPHLKR VCFLGMEKHR GMYSVPEILS
LSVMVDDEEY KARQDSLHPW DVINMQYTSG TTGFPRGVML THVGVGLNGY WIGRHQNFGP
EDRVCLPVPL FHCFGCVLGV SACVNHGAAM VILESFNPLK VLAAVDSERC TALYGVPTMF
LAELEHKLFH RFDMSSLRTG IMAGSVCPEP LMRRVIDDMN MKEITICYGL TEGSPVMTQS
DSHDSLQLRC ETVGCAMPGI EVRVADPETC EELPRGQVGE ILCRGYNVMK GYYNMPEDTA
RAVSPDGWLH SGDLGVMDEN GYLRITGRIK DMIIRGGENV YPREIEEYLM GMPGVLDVQV
VAVPSFKYGE EVAAFIIPRP GVEIGPEDVR AFCRGKIAWF KIPKYVAVIS GFPLTASGKI
QKYKLREQAA QMWPEAMEPK Q