Gene Ddes_2283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2283 
Symbol 
ID7286001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2748319 
End bp2749647 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content62% 
IMG OID643583106 
ProductMiaB-like tRNA modifying enzyme YliG 
Protein accessionYP_002480856 
Protein GI220905544 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125
[TIGR00089] RNA modification enzyme, MiaB family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.135903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGTG CAAACAAACA GAAAAAAATC AAGGTCTGGT CGCTGAGCCT GGGATGTCCC 
AAAAACAGGG TCGACAGCGA GCGCCTGCTC GGTTCGCTGG GTGCGCCTGT GAGCCATGTG
GAGCACATGG GCCGCGCTGA TCTTGTATTC ATCAATACCT GTGGATTTAT TGATCCCGCC
GTGCGCGAAT CCGTGCGCGC CGTTCTGGAT GCGGGGCAGC GTCTGGGCCG TTGCAGCAAA
AAGCCTCTGC TGGCTGTGGG CGGCTGCATG GTGGGCCGTT ACGGTGCGGA AAACCTGGCT
GAAGATCTGC CCGAAGTGGA TCTGTGGCTA CCCACGGCTG ATCTGGACCG CTGGCCCGGC
ATGGTGGCCG AGGCCCTGGC CCTGCCCACG CCGCCTGTGC GTATGCCCGG CGGCGGCAGG
CTGCTTTCCA CGGGGCCTTC CTACGCATGG CTCAAGATAG GCGAAGGCTG CCGGCACAAA
TGTGCCTTTT GCACCATTCC CTCCATCAGG GGGGGGCTGC ATTCGCTGCC TGCCGAATAT
ATTGTGGACG AGGCCCGCGC CCTGCTGGGG CAGGGAGTTC GCGAACTGGC CCTTGTGGCT
CAGGATCTGA CGGCCTGGGG TGCGGATCTG GGCATGAAAA ACGGTCTTCC TTCCCTGCTG
GAAAAACTTG CCGCGCTGGA CGGTCTGGCC TGGCTGCGCC TGCTCTATCT GTACCCCAGC
GGAGTGACCC CGGAACTTCT TGCCCTCATA CGCGATACCG GGGCACCGCT TTTGCCCTAT
CTGGATATTC CCCTGCAGCA TGCCCACCCC GATGTACTCT CGCGCATGGG CAGGCCTTTT
GCGGGCAACC CCCGGCGCGT GCTGGATGCC GTGCGGCAAA ATTTGCCGCA CGCGGCCCTG
CGCACCACAT TTATTGTGGG TTACCCCGGC GAGACGGATG AACAGTTTGA AAGCCTGTGC
CGCTTTGTGG AAGAAAGCGC TTTTCAGCAT GTGGGGGTAT TTGCCTATCA GGCTGAAGAC
GGCACAGAAG CGGCGACCTT GCCGGATCAG GTGCCGGATG CGGTCAAGCA GTGGCGGCGC
GATACTCTTA TGGACATACA GGCAGATATC AGCGAACGCC TGCTGGCGGC CCATGTGGGC
AGTCGCATGC AGGTGCTGGT GGATGCGCCG CATCCCGAGT GGCCGGGCCT GCACAGCGGG
CGCGTGTGGC TTCAGGCCCC GGAGGTGGAC GGCATCACCT ATGTAAGCGG GCCGGGCGTC
GCGCCCGGAG CGCTGGTGGA ATGCGACATT GTGGAAAATA CCGAATATGA TCTGACTGCA
CTGGCCTAA
 
Protein sequence
MTSANKQKKI KVWSLSLGCP KNRVDSERLL GSLGAPVSHV EHMGRADLVF INTCGFIDPA 
VRESVRAVLD AGQRLGRCSK KPLLAVGGCM VGRYGAENLA EDLPEVDLWL PTADLDRWPG
MVAEALALPT PPVRMPGGGR LLSTGPSYAW LKIGEGCRHK CAFCTIPSIR GGLHSLPAEY
IVDEARALLG QGVRELALVA QDLTAWGADL GMKNGLPSLL EKLAALDGLA WLRLLYLYPS
GVTPELLALI RDTGAPLLPY LDIPLQHAHP DVLSRMGRPF AGNPRRVLDA VRQNLPHAAL
RTTFIVGYPG ETDEQFESLC RFVEESAFQH VGVFAYQAED GTEAATLPDQ VPDAVKQWRR
DTLMDIQADI SERLLAAHVG SRMQVLVDAP HPEWPGLHSG RVWLQAPEVD GITYVSGPGV
APGALVECDI VENTEYDLTA LA