Gene Ddes_2257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2257 
Symbol 
ID7285974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp2716454 
End bp2717095 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content57% 
IMG OID643583079 
Productredox-sensing transcriptional repressor Rex 
Protein accessionYP_002480830 
Protein GI220905518 
COG category[R] General function prediction only 
COG ID[COG2344] AT-rich DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.320604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAACC AACCCAAAAG CAAACACATT CCCCGCGCCA CCATCCAGCG CCTCGCCACG 
TACGTACAGG TGCTGGAGAA CTTCTCCCGC GACAATGTGG AGGTCATTTC CTCCAACCCC 
CTGGCCGAGG CCTGCGGGGT CAACGGTTCG CAGGTGCGCA AAGACCTTGC CTACTTTGGC 
GAGTTCGGCA TTCGCGGGGT GGGCTACCAT GTAAAATCCC TGATTGCCGC CATCACCTCT 
TCGCTTGGTG TTGACCGCGA ATGGCGTATG GCCCTGATCG GTGTCGGCAA CCTCGGCAAG 
GCCATCCTTA ACCATGGTGA ATTCCGCGCT CGCGGCTTCA ATATCGTGGC CATATTTGAC 
TGCGACCCCT TCAAGATCGG TGAAATTGTC CACGGCCTTG AAGTGCATTG CACCCGCGAT 
CTCAAGGATA TGGTGTCTGA CCTGAATATT GAAATCGGCA TCATCACCAC CCCGCCTGAA 
AGGGCGCAGC GGGCTGCCCA GCACCTTATG GACGCGGGCA TTACCTCCAT ACTGAACTTC 
GCGCCCGCGC GCATCAAGGT TCCTGAGCGT ATCAATGTGG AATACGTTGA CTTTTTCCAC 
CACCTTTATG CTCTGGCCTT CAACCACCCC ATGACCCGCT AG
 
Protein sequence
MANQPKSKHI PRATIQRLAT YVQVLENFSR DNVEVISSNP LAEACGVNGS QVRKDLAYFG 
EFGIRGVGYH VKSLIAAITS SLGVDREWRM ALIGVGNLGK AILNHGEFRA RGFNIVAIFD 
CDPFKIGEIV HGLEVHCTRD LKDMVSDLNI EIGIITTPPE RAQRAAQHLM DAGITSILNF 
APARIKVPER INVEYVDFFH HLYALAFNHP MTR