Gene Ddes_2121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2121 
Symbol 
ID7285837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2555923 
End bp2558163 
Gene Length2241 bp 
Protein Length746 aa 
Translation table11 
GC content64% 
IMG OID643582943 
ProductRadical SAM domain protein 
Protein accessionYP_002480695 
Protein GI220905383 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACTA AACGCTCCGG TCCGGCACTT TCCGCGCCCC GGCCTCCCGC AGGGAATGCC 
GGGGCCGCTT CCGTCTCCGG CCCTGACAGC CTGCATCGGC AGCCTCTTTT TGTCCCTATG
AGCGTGGAAG AAATGCACGC CCTCGGCTGG GACTGTCTGG ATGTGCTCTT TGTCACCGGC
GATGCCTATG TGGACCATTC CTCTTTTGGC AGCGTACTGC TGGCCCGCTG GCTCATCCAC
CACGGCTTTC GCGCCGGCAT TGTGGCCCAG CCCCGCTGGG ACAAGCCGGA TGACCTGCTG
GTTATGGGCA GGCCGCGCCT GTTCGCCGGA ATCAGCGCGG GCGCGCTGGA CTCCCTGCTG
GCTCACTACA CCGCCTTTCG CAAAAAGCGG CATGACGATG CCTATACCCC GGGCGGCAAA
GCCGGAGCGC GGCCCAACCG GGCCTGTCTC GTTTATGCCA ACCTGGCCCG CAGGGCTTTT
CCGGGCCTGC CGCTGGCCCT TGGCGGCATA GAGGCCAGCC TGCGCCGGGT GAGCCACTAT
GATTTCTGGA CAGACTCCCT GCGCAAACCC ATACTTATGG ATGCCAAGGC TGACCTGCTT
ATCTGGGGCA TGGGTGAATA CGCCACGCTT GAATATGCCC GGCGGCTTCA TAAAGCTGAA
GATACGCGCG GCATCCCCGG CACAGCCTGG CTCGACAGGC TCGAGCAGAC GCCGGAAGGC
CCCCGGCCAG CCGGCCTGCC GCCGGAGCTG GCCCAAACCC CGGCCGTGCC ACTGCCGTCC
CATGAAGACA TCCTGGCCGA TCCCGTACAA CTGCTTGTCA TGACCCAGGC CCTGGAGCGC
CAGGTACACA GGCTGGACGC CTGGGCTTTT CAGCCCGTGG GCGACCGCGC CCTTGTGCTG
GCCCGCCCCG CGCCCCCCCT GACAACAGAA GAAATGGATG CACTGTACGA AATTCCCTTT
ACCCGGCGGC CCCACCCAAG TTACCGCGAA CCCATACCAG CGGCAGAAAT GATGCGCACC
AGCATTACCA GCCACAGGGG CTGCGGCGGT GGCTGCTCTT TCTGCTCACT GGCCCTGCAC
CAGGGGCGCC GCATCAGCTC GCGTTCCGAA GACTCCATTC TGGCCGAAGC CCGCAGGCTC
GGACAGGAAA ACATGGAGCG CGGCAAGGGG CCGGTAGCCA TATCAGACGT AGGCGGTCCC
ACAGCCAACA TGTGGCAGGG CTACTGCGCC CTGGACCGCA TGCATGAGCG CGGGTCCGCA
AACCGCACGA ATCCCGCGCC GGCCCAACCC CGTTCACAGG CCGGGGCGGA GGAGCGCAAT
ACAAGCCGCT GCCGCCGCAC GAGCTGCTGT TATCCCACAA TCTGCAAGTT TTTCACCACG
CCGCAGGGCA AACATGTGGG TCTGCTGCGC AGTGTGGCCG CCCTGCCCGA AGTCAAACAG
GCCCGTATTG CCAGCGGTGT CCGGGCCGAC CTGGCCTTGC GTGATGCCGC CGCCCTGGCT
GCCTATACGG GCGAATTCAC GGGCGGGCAG CTCAAGGTGG CCCCAGAGCA TTGCGCCCCC
GGCGTATTGA GCCTCATGCG CAAGCCGCCG CTGGAAGTTT TTGAAGCCTT TCTGGCAAGC
TTTATTCGCC AGAGCAAGGC GGCAGGCCGC GAACAGTATG TTGTCCCCTA CCTTCTCAGC
GGTTTTCCCG GCTGCACGGA TAACGATATG CGCACTCTCG CGAACTGGCT GCGTGAGCGC
AACTGGAATC CCCGCCAGAC CCAGTGCTTT ATCCCCACGC CCGGAACCAT AGCCACGGCC
ATGTTTTATT GCGGTAAAAA TGAAGCCGGA GAAGACATTT ACGTAGCCCG CACCGATGCC
CAGCGCCTGC GGCAGCACGG CATCCTCATG CCTGGACGCA GCAGCGCCGA GGCCAGAAGG
CAGGACAGGC CAAACAGACC AGACAGGCAG GGCAAAAAAG CTGCTGCGGA AAAGGACGCT
ACAGCGGGCA AACGTACTGC CCCGGGGCGG GAGCACGGCG AAAAGCGCCA CAACGGCAAC
AAGACGGAAC ACACGGCGGG CAGCGGCCGC AGCCGGGGAA CAAACCGGCC CGACCACCCC
GCAAGGCCAG ACCGTTCCAG GCGCACGGCA GAGCAACATC CGCCTCGCGA AGCAGAACGC
GCAAGAGATG GAAAAACCGG CCGGGGCAGT GACCGCGGCC CCAAAACAGC AAAATTTCCC
GTCCCCGGAC GCCGAGCCTG A
 
Protein sequence
MATKRSGPAL SAPRPPAGNA GAASVSGPDS LHRQPLFVPM SVEEMHALGW DCLDVLFVTG 
DAYVDHSSFG SVLLARWLIH HGFRAGIVAQ PRWDKPDDLL VMGRPRLFAG ISAGALDSLL
AHYTAFRKKR HDDAYTPGGK AGARPNRACL VYANLARRAF PGLPLALGGI EASLRRVSHY
DFWTDSLRKP ILMDAKADLL IWGMGEYATL EYARRLHKAE DTRGIPGTAW LDRLEQTPEG
PRPAGLPPEL AQTPAVPLPS HEDILADPVQ LLVMTQALER QVHRLDAWAF QPVGDRALVL
ARPAPPLTTE EMDALYEIPF TRRPHPSYRE PIPAAEMMRT SITSHRGCGG GCSFCSLALH
QGRRISSRSE DSILAEARRL GQENMERGKG PVAISDVGGP TANMWQGYCA LDRMHERGSA
NRTNPAPAQP RSQAGAEERN TSRCRRTSCC YPTICKFFTT PQGKHVGLLR SVAALPEVKQ
ARIASGVRAD LALRDAAALA AYTGEFTGGQ LKVAPEHCAP GVLSLMRKPP LEVFEAFLAS
FIRQSKAAGR EQYVVPYLLS GFPGCTDNDM RTLANWLRER NWNPRQTQCF IPTPGTIATA
MFYCGKNEAG EDIYVARTDA QRLRQHGILM PGRSSAEARR QDRPNRPDRQ GKKAAAEKDA
TAGKRTAPGR EHGEKRHNGN KTEHTAGSGR SRGTNRPDHP ARPDRSRRTA EQHPPREAER
ARDGKTGRGS DRGPKTAKFP VPGRRA